BLASTX nr result

ID: Lithospermum22_contig00038348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038348
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO93003.1| putative regulator of chromosome condensation RCC...    91   1e-16
gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]        91   1e-16
ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250...    84   9e-15
emb|CBI31979.3| unnamed protein product [Vitis vinifera]               84   9e-15
ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinu...    79   3e-13

>gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/110 (43%), Positives = 66/110 (60%)
 Frame = +1

Query: 1   VDPSGIPLTENIGQSRLGKAFADIVSYTAANKNYNSPDTSAQSLNSVSPVVEEDVAVRCS 180
           +D      TE++ QSRLGKA+ADI+ YTAA K+    +T + +L+S+S    ++   R S
Sbjct: 177 IDQGDNQRTESLPQSRLGKAYADIIQYTAAGKSPTLVETGSFNLSSLSAGAVDNSNARSS 236

Query: 181 STEAWRVXXXXXXXXXXXXXLHEDFDTLGDCFIWGEGTGNAVLGGGELRI 330
           + + +RV               EDFD LGD FIWGEGTGN +LGGG+ RI
Sbjct: 237 TADTFRVSLSSALSSSSQGSCLEDFDNLGDVFIWGEGTGNGLLGGGKHRI 286


>gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/110 (43%), Positives = 66/110 (60%)
 Frame = +1

Query: 1   VDPSGIPLTENIGQSRLGKAFADIVSYTAANKNYNSPDTSAQSLNSVSPVVEEDVAVRCS 180
           +D      TE++ QSRLGKA+ADI+ YTAA K+    +T + +L+S+S    ++   R S
Sbjct: 177 IDQGDNQRTESLPQSRLGKAYADIIQYTAAGKSPTLVETGSFNLSSLSAGAVDNSNARSS 236

Query: 181 STEAWRVXXXXXXXXXXXXXLHEDFDTLGDCFIWGEGTGNAVLGGGELRI 330
           + + +RV               EDFD LGD FIWGEGTGN +LGGG+ RI
Sbjct: 237 TADTFRVSLSSALSSSSQGSCLEDFDNLGDVFIWGEGTGNGLLGGGKHRI 286


>ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/101 (41%), Positives = 63/101 (62%)
 Frame = +1

Query: 28  ENIGQSRLGKAFADIVSYTAANKNYNSPDTSAQSLNSVSPVVEEDVAVRCSSTEAWRVXX 207
           ENI QS LGKAF+D++SYTA+ K++   ++ A SL+S+S    ++   R S++E +RV  
Sbjct: 170 ENIPQSGLGKAFSDVISYTASTKSFTQAESVASSLSSLSSGGVDNSNGRTSASENFRVSL 229

Query: 208 XXXXXXXXXXXLHEDFDTLGDCFIWGEGTGNAVLGGGELRI 330
                       H+DFD LGD F+WGEG G+ ++G G  R+
Sbjct: 230 SSAVSSSSQGSGHDDFDALGDVFMWGEGIGDGIMGAGVHRV 270


>emb|CBI31979.3| unnamed protein product [Vitis vinifera]
          Length = 429

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/101 (41%), Positives = 63/101 (62%)
 Frame = +1

Query: 28  ENIGQSRLGKAFADIVSYTAANKNYNSPDTSAQSLNSVSPVVEEDVAVRCSSTEAWRVXX 207
           ENI QS LGKAF+D++SYTA+ K++   ++ A SL+S+S    ++   R S++E +RV  
Sbjct: 170 ENIPQSGLGKAFSDVISYTASTKSFTQAESVASSLSSLSSGGVDNSNGRTSASENFRVSL 229

Query: 208 XXXXXXXXXXXLHEDFDTLGDCFIWGEGTGNAVLGGGELRI 330
                       H+DFD LGD F+WGEG G+ ++G G  R+
Sbjct: 230 SSAVSSSSQGSGHDDFDALGDVFMWGEGIGDGIMGAGVHRV 270


>ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223538286|gb|EEF39893.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 1042

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
 Frame = +1

Query: 4   DPSGIPLT-ENIGQSRLGKAFADIVSYTAANKNYNSPDTSAQSLNSVSPVVEEDVAVRCS 180
           D  G P+  E+I  +RLGKAF DI+SYTAA K+ +  +  +   +S++    ++   R S
Sbjct: 167 DGQGSPVPFESIPSNRLGKAFCDIISYTAAEKSPSRAELLSSPFSSLNAACVDNSNGRTS 226

Query: 181 STEAWRVXXXXXXXXXXXXXLHEDFDTLGDCFIWGEGTGNAVLGGG 318
           + +  RV              HEDFD LGD F WGEG G+ +LGGG
Sbjct: 227 TADTVRVSLSSAVSSSSQGSYHEDFDALGDVFFWGEGVGDGILGGG 272


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