BLASTX nr result

ID: Lithospermum22_contig00038320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038320
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin...   132   4e-29
emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]   129   2e-28
ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containin...   125   4e-27
ref|XP_003593956.1| Zinc finger CCCH domain-containing protein [...   124   8e-27
ref|XP_003541660.1| PREDICTED: zinc finger CCCH domain-containin...   122   4e-26

>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
           vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score =  132 bits (331), Expect = 4e-29
 Identities = 55/79 (69%), Positives = 67/79 (84%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   PGGETGLEEPMWQLGLNSGPESYPERPNESDCVYYLRTGFCGFGDRCRYNHPPDNGGI-G 177
           P  ETGLEEP+WQLGL  G E+YPERP+E+DC+YYL+TGFCG+G RCR+NHP D GG+ G
Sbjct: 24  PVAETGLEEPLWQLGLGGGGEAYPERPDEADCIYYLKTGFCGYGARCRFNHPRDRGGVGG 83

Query: 178 TMRRSAGEYPERMGQPVCQ 234
           T+R   GE+PER+GQPVCQ
Sbjct: 84  TVRPGGGEFPERVGQPVCQ 102


>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
          Length = 518

 Score =  129 bits (325), Expect = 2e-28
 Identities = 54/79 (68%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   PGGETGLEEPMWQLGLNSGPESYPERPNESDCVYYLRTGFCGFGDRCRYNHPPDNGGI-G 177
           P  ETGLEEP+W LGL  G E+YPERP+E+DC+YYL+TGFCG+G RCR+NHP D GG+ G
Sbjct: 64  PVAETGLEEPLWXLGLGGGGEAYPERPDEADCIYYLKTGFCGYGARCRFNHPRDRGGVGG 123

Query: 178 TMRRSAGEYPERMGQPVCQ 234
           T+R   GE+PER+GQPVCQ
Sbjct: 124 TVRPGGGEFPERVGQPVCQ 142


>ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
           [Glycine max]
          Length = 481

 Score =  125 bits (314), Expect = 4e-27
 Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
 Frame = +1

Query: 1   PGGETGLEEPMWQLGLN-SGPESYPERPNESDCVYYLRTGFCGFGDRCRYNHPPDNGGIG 177
           P  +TGLEEPMWQLG+  +G ESYP+RP+E DC YYLRTGFCGFG RCR+NHP D   + 
Sbjct: 22  PEAQTGLEEPMWQLGMGGAGEESYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRAAVA 81

Query: 178 TMRRSAGEYPERMGQPVCQ 234
              R+ GEYPER+GQPVCQ
Sbjct: 82  GAERTTGEYPERVGQPVCQ 100


>ref|XP_003593956.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355483004|gb|AES64207.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 482

 Score =  124 bits (311), Expect = 8e-27
 Identities = 56/82 (68%), Positives = 63/82 (76%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   PGGETGLEEPMWQLGLNSG---PESYPERPNESDCVYYLRTGFCGFGDRCRYNHPPDNGG 171
           P  +TGLEEPMWQLGL SG    +SYP+RP+E DC YYLRTGFCGFG RCR+NHP D   
Sbjct: 19  PDSQTGLEEPMWQLGLGSGGSGEDSYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRAA 78

Query: 172 -IGTMRRSAGEYPERMGQPVCQ 234
            IG   R+ GEYPER+GQPVCQ
Sbjct: 79  VIGAASRTVGEYPERVGQPVCQ 100


>ref|XP_003541660.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
           [Glycine max]
          Length = 491

 Score =  122 bits (305), Expect = 4e-26
 Identities = 52/80 (65%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
 Frame = +1

Query: 1   PGGETGLEEPMWQLGLN--SGPESYPERPNESDCVYYLRTGFCGFGDRCRYNHPPDNGGI 174
           P  +TGLEEP+WQLG+   +G ESYP+RP+E DC YYLRTGFCGFG RCR+NHP D   +
Sbjct: 22  PEAQTGLEEPVWQLGMGGGAGEESYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRAVV 81

Query: 175 GTMRRSAGEYPERMGQPVCQ 234
               R+AGE+PER+GQPVCQ
Sbjct: 82  AGAERTAGEHPERVGQPVCQ 101


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