BLASTX nr result

ID: Lithospermum22_contig00038279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038279
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP03878.1| Avr9/Cf-9 rapidly elicited protein 189 [Nicotiana...   176   1e-42
ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g...   163   2e-38
ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355...   162   3e-38
ref|XP_003539331.1| PREDICTED: F-box protein SKIP2-like [Glycine...   160   1e-37
ref|XP_003589128.1| F-box protein [Medicago truncatula] gi|87240...   158   4e-37

>gb|AAP03878.1| Avr9/Cf-9 rapidly elicited protein 189 [Nicotiana tabacum]
          Length = 550

 Score =  176 bits (447), Expect = 1e-42
 Identities = 91/154 (59%), Positives = 110/154 (71%)
 Frame = -1

Query: 462 LNSAAEITPFIPSLFTRFDSITKLSLQCDRKSASIDDNSLGIISLRCVNLTRLKLRGCRD 283
           LN+ AE  P IP++F+RFDS TKL+L+CDRKS SI+D +L +ISLRCVNLTRLKLRGCRD
Sbjct: 103 LNAKAEFLPHIPTIFSRFDSGTKLALRCDRKSVSINDEALTLISLRCVNLTRLKLRGCRD 162

Query: 282 VSDVGMGVLGRNCRVLRKFSCGSCMFGAKGMNALLNNCVTLQELSVKRLRGLXXXXXXXX 103
           V+DVGM    +NC+ L+KFSCGSCMFGAKGMNALL++C TL+ELSVKRLRG+        
Sbjct: 163 VTDVGMSAFAKNCKSLKKFSCGSCMFGAKGMNALLDHCSTLEELSVKRLRGI-------- 214

Query: 102 XXXXXXXXXXXXXXGTDMVCGNLKGVYLKELYNG 1
                         G      +LK + LKELYNG
Sbjct: 215 -----NDGFAADPIGPGAAASSLKSICLKELYNG 243


>ref|XP_002301165.1| f-box family protein [Populus trichocarpa]
           gi|222842891|gb|EEE80438.1| f-box family protein
           [Populus trichocarpa]
          Length = 533

 Score =  163 bits (412), Expect = 2e-38
 Identities = 79/154 (51%), Positives = 107/154 (69%)
 Frame = -1

Query: 462 LNSAAEITPFIPSLFTRFDSITKLSLQCDRKSASIDDNSLGIISLRCVNLTRLKLRGCRD 283
           LN+ +++ PF+ SLF+RFD++TKL+L+CDR+S SI D +L  IS+RC NLTRLKLR CR+
Sbjct: 94  LNAQSDLLPFVTSLFSRFDAVTKLALKCDRRSVSIGDEALVAISIRCRNLTRLKLRACRE 153

Query: 282 VSDVGMGVLGRNCRVLRKFSCGSCMFGAKGMNALLNNCVTLQELSVKRLRGLXXXXXXXX 103
           ++D GM    +NC+ L+KFSCGSC FGAKGMNA+L+NC +L++LSVKRLRG+        
Sbjct: 154 ITDAGMAAFAKNCKALKKFSCGSCAFGAKGMNAMLDNCASLEDLSVKRLRGI-------- 205

Query: 102 XXXXXXXXXXXXXXGTDMVCGNLKGVYLKELYNG 1
                         G  +   +LK + LKELYNG
Sbjct: 206 -----TDGATAEPIGPGLAAASLKTICLKELYNG 234


>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
           skip-2, putative [Ricinus communis]
          Length = 536

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/154 (53%), Positives = 106/154 (68%)
 Frame = -1

Query: 462 LNSAAEITPFIPSLFTRFDSITKLSLQCDRKSASIDDNSLGIISLRCVNLTRLKLRGCRD 283
           L++ +++ P I +LFTRFD++TKL+L+CDRKSASI D +L  ISLRC NLTRLKLR CRD
Sbjct: 96  LHAQSDLLPVISALFTRFDAVTKLALRCDRKSASIGDEALEAISLRCRNLTRLKLRSCRD 155

Query: 282 VSDVGMGVLGRNCRVLRKFSCGSCMFGAKGMNALLNNCVTLQELSVKRLRGLXXXXXXXX 103
           V+D GM    +NC+ L+K SCGSC FGAKGMNA+L+NC +L+ELS+KRLRG+        
Sbjct: 156 VTDAGMAAFAKNCKGLKKLSCGSCTFGAKGMNAVLDNCASLEELSIKRLRGI-------- 207

Query: 102 XXXXXXXXXXXXXXGTDMVCGNLKGVYLKELYNG 1
                         G  +   +LK + LKELYNG
Sbjct: 208 -----TDGAAAEPIGPGLAANSLKTICLKELYNG 236


>ref|XP_003539331.1| PREDICTED: F-box protein SKIP2-like [Glycine max]
          Length = 526

 Score =  160 bits (405), Expect = 1e-37
 Identities = 82/157 (52%), Positives = 110/157 (70%), Gaps = 3/157 (1%)
 Frame = -1

Query: 462 LNSAAEITPFIPSLFTRFDSITKLSLQCDRKSASIDDNSLGIISLRCVNLTRLKLRGCRD 283
           LN+  E+  F+PSLF RFDS+TKL+L+CDRK ASI+D++L +ISLRC NLTRLKLRGCRD
Sbjct: 78  LNAQPELLDFVPSLFNRFDSVTKLALRCDRKCASINDDALVLISLRCRNLTRLKLRGCRD 137

Query: 282 VSDVGMGVLGRNCRVLRKFSCGSCMFGAKGMNALLNNCVTLQELSVKRLRGLXXXXXXXX 103
           ++++GM  +G NC+ L+K SC SCMFGAKG+ A+L+ CVTL++L++KRLRG+        
Sbjct: 138 ITELGMAGVGENCKALKKLSCASCMFGAKGIAAVLDRCVTLEDLTLKRLRGV-------- 189

Query: 102 XXXXXXXXXXXXXXGTDMVCG---NLKGVYLKELYNG 1
                          TD+  G   +LK + LKEL NG
Sbjct: 190 ------------HHITDVEVGAAASLKSICLKELVNG 214


>ref|XP_003589128.1| F-box protein [Medicago truncatula] gi|87240761|gb|ABD32619.1|
           Cyclin-like F-box [Medicago truncatula]
           gi|355478176|gb|AES59379.1| F-box protein [Medicago
           truncatula]
          Length = 547

 Score =  158 bits (400), Expect = 4e-37
 Identities = 82/154 (53%), Positives = 102/154 (66%)
 Frame = -1

Query: 462 LNSAAEITPFIPSLFTRFDSITKLSLQCDRKSASIDDNSLGIISLRCVNLTRLKLRGCRD 283
           LN+  ++ P IPSLF RFDS+TKL+L+CDR+S SI D +L IIS RC NLTRLKLR CR+
Sbjct: 104 LNAKLDLLPVIPSLFNRFDSVTKLALKCDRRSVSIRDEALVIISERCPNLTRLKLRACRE 163

Query: 282 VSDVGMGVLGRNCRVLRKFSCGSCMFGAKGMNALLNNCVTLQELSVKRLRGLXXXXXXXX 103
           ++D GM    +NC+ LRK SCGSC FG+KGMNA+L NC  L+ELSVKRLRG+        
Sbjct: 164 LTDAGMEAFAKNCKGLRKLSCGSCTFGSKGMNAVLENCAALEELSVKRLRGI-------- 215

Query: 102 XXXXXXXXXXXXXXGTDMVCGNLKGVYLKELYNG 1
                         G  +   +LK + LKELYNG
Sbjct: 216 -----AETAVAEPIGPGVAAASLKTICLKELYNG 244


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