BLASTX nr result
ID: Lithospermum22_contig00038255
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00038255 (336 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript... 77 2e-12 gb|ABK28243.1| unknown [Arabidopsis thaliana] 77 2e-12 gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thali... 77 2e-12 gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 76 2e-12 ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204... 74 9e-12 >ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family protein [Arabidopsis thaliana] gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity to a family of Arabidopsis thaliana predicted proteins, which have similarity to reverse transcriptases; see T14P8.10 (GB:AF069298) [Arabidopsis thaliana] gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA polymerase (reverse transcriptase)-related family protein [Arabidopsis thaliana] Length = 332 Score = 76.6 bits (187), Expect = 2e-12 Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 1/91 (1%) Frame = +1 Query: 1 WNTIRNRGHTPPWYRLIWFKGNV*MFAFIMWLLCNGKLQTKDKLLQWSVVDNDNYVLCGG 180 W+ + + HT PW++ +WFK +V AFI W++ +L T+D+L W + +LC Sbjct: 117 WSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNA 176 Query: 181 -NESVHHLFFSCEFSSQIWRKMLYTNNFHIP 270 ++S HLFF C+FS +WR + N + P Sbjct: 177 HDDSRAHLFFECQFSGVVWRFFTASTNLNPP 207 >gb|ABK28243.1| unknown [Arabidopsis thaliana] Length = 297 Score = 76.6 bits (187), Expect = 2e-12 Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 1/91 (1%) Frame = +1 Query: 1 WNTIRNRGHTPPWYRLIWFKGNV*MFAFIMWLLCNGKLQTKDKLLQWSVVDNDNYVLCGG 180 W+ + + HT PW++ +WFK +V AFI W++ +L T+D+L W + +LC Sbjct: 117 WSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNA 176 Query: 181 -NESVHHLFFSCEFSSQIWRKMLYTNNFHIP 270 ++S HLFF C+FS +WR + N + P Sbjct: 177 HDDSRAHLFFECQFSGVVWRFFTASTNLNPP 207 >gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thaliana] Length = 296 Score = 76.6 bits (187), Expect = 2e-12 Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 1/91 (1%) Frame = +1 Query: 1 WNTIRNRGHTPPWYRLIWFKGNV*MFAFIMWLLCNGKLQTKDKLLQWSVVDNDNYVLCGG 180 W+ + + HT PW++ +WFK +V AFI W++ +L T+D+L W + +LC Sbjct: 117 WSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNA 176 Query: 181 -NESVHHLFFSCEFSSQIWRKMLYTNNFHIP 270 ++S HLFF C+FS +WR + N + P Sbjct: 177 HDDSRAHLFFECQFSGVVWRFFTASTNLNPP 207 >gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana] gi|20197043|gb|AAM14892.1| putative reverse transcriptase [Arabidopsis thaliana] Length = 1412 Score = 76.3 bits (186), Expect = 2e-12 Identities = 41/95 (43%), Positives = 52/95 (54%), Gaps = 8/95 (8%) Frame = +1 Query: 1 WNTIRNRGHTPPWYRLIWFKGNV*MFAFIMWLLCNGKLQTKDKLLQWSVVDNDNYVLCG- 177 W+ IR +G W++ IWF G F FI WL + +L T DK+ W+ + VLC Sbjct: 1227 WHQIREQGLVKQWHKAIWFSGATPKFTFISWLAAHDRLTTGDKMASWNRGISSVCVLCNI 1286 Query: 178 GNESVHHLFFSCEFSSQIW----RKML---YTNNF 261 ES HLFFSC FSS IW R++L YT NF Sbjct: 1287 SAESRDHLFFSCNFSSHIWDRLTRRLLLCRYTTNF 1321 >ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus] Length = 282 Score = 74.3 bits (181), Expect = 9e-12 Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 2/114 (1%) Frame = +1 Query: 1 WNTIRNRGHTPPWYRLIWFKGNV*MFAFIMWLLCNGKLQTKDKLLQWSVVDNDNYVLCGG 180 W TIR W L+W GN+ +F WL +L T+ +L +W + +LCGG Sbjct: 114 WETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRDRLGTRGRLSRWDRSIPLSCLLCGG 173 Query: 181 N-ESVHHLFFSCEFSSQIW-RKMLYTNNFHIPNSWDQKLQKIYVDGVDNDFPRR 336 N ES HLFFSC F +IW R +L ++ H W +L IY G+ R+ Sbjct: 174 NYESRDHLFFSCHFGWEIWSRILLLKSSSHRTGYWGVELSWIYNQGIGKSVRRK 227