BLASTX nr result
ID: Lithospermum22_contig00038222
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00038222
(244 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002511572.1| pentatricopeptide repeat-containing protein,... 115 4e-24
ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 109 3e-22
ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat... 109 3e-22
ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago ... 108 3e-22
ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat... 108 4e-22
>ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550687|gb|EEF52174.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 735
Score = 115 bits (288), Expect = 4e-24
Identities = 50/81 (61%), Positives = 68/81 (83%)
Frame = -1
Query: 244 METFKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALING 65
METFK ++EKGC PNII+YNILIESLC+ RKV A+D+L+E+ NRGL PD V++G +I+G
Sbjct: 488 METFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISG 547
Query: 64 FCENGETDFAFEIFRSVEKQY 2
FC NG+ D A+++FR +E+QY
Sbjct: 548 FCNNGDLDEAYQLFRRMEQQY 568
Score = 58.5 bits (140), Expect = 5e-07
Identities = 24/72 (33%), Positives = 43/72 (59%)
Frame = -1
Query: 229 AMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGFCENG 50
A + KG P+I ++N LI+ C+ K+ AI +L M + G+ PD +TY +++NG C+
Sbjct: 423 AAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAA 482
Query: 49 ETDFAFEIFRSV 14
+ + E F+ +
Sbjct: 483 KPEDVMETFKMI 494
>ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 109 bits (272), Expect = 3e-22
Identities = 50/81 (61%), Positives = 64/81 (79%)
Frame = -1
Query: 244 METFKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALING 65
++TFKAMLEKGC PNII+YNILIES C+DRKV A+++ +EM+ RGL PD VT LI G
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575
Query: 64 FCENGETDFAFEIFRSVEKQY 2
C NGE D A+E+F ++EK+Y
Sbjct: 576 LCSNGELDKAYELFVTIEKEY 596
Score = 64.7 bits (156), Expect = 7e-09
Identities = 25/70 (35%), Positives = 45/70 (64%)
Frame = -1
Query: 223 LEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGFCENGET 44
+ KGC P+I ++N LI+ C+ R + +AI++L M + G+ PD +TY L+NG C+ +
Sbjct: 453 IAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKL 512
Query: 43 DFAFEIFRSV 14
D + F+++
Sbjct: 513 DNVVDTFKAM 522
Score = 63.2 bits (152), Expect = 2e-08
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = -1
Query: 244 METFKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALING 65
+E ML G P++I+YN L+ LC+ RK+ +D + M +G P+ +TY LI
Sbjct: 481 IEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIES 540
Query: 64 FCENGETDFAFEIFRSVE 11
FC++ + A E+F+ ++
Sbjct: 541 FCKDRKVSEAMELFKEMK 558
Score = 56.6 bits (135), Expect = 2e-06
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = -1
Query: 232 KAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGFCEN 53
++++ +G P++ISYN LI C+ K+ A L +M N G+ P++ TY +INGFC+
Sbjct: 275 ESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKA 334
Query: 52 GETDFAFEIFR 20
G A +I R
Sbjct: 335 GMMQNADKILR 345
Score = 56.6 bits (135), Expect = 2e-06
Identities = 25/73 (34%), Positives = 43/73 (58%)
Frame = -1
Query: 244 METFKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALING 65
++ K M+E GC+P+I +YN+++ LC+ + A +L + +G PD T+ LI+G
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Query: 64 FCENGETDFAFEI 26
+C+ D A EI
Sbjct: 471 YCKQRNMDKAIEI 483
Score = 56.2 bits (134), Expect = 3e-06
Identities = 22/63 (34%), Positives = 40/63 (63%)
Frame = -1
Query: 235 FKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGFCE 56
F ++++G PN+ ++NI I+ LCR + A +L+ + + GL PD ++Y LI GFC+
Sbjct: 239 FSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK 298
Query: 55 NGE 47
+ +
Sbjct: 299 HSK 301
Score = 55.8 bits (133), Expect = 3e-06
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = -1
Query: 226 MLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGFCENGE 47
M+ G PN +YN +I C+ ++ A +L++ +G PD+ TY +LING C +G+
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 46 TDFAFEIF-RSVEKQY 2
+ A +F ++EK +
Sbjct: 372 MNRAMAVFYEAMEKGF 387
Score = 54.7 bits (130), Expect = 8e-06
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = -1
Query: 235 FKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGFCE 56
F ML++G P+I+++N LI LC+ V+ + + ++ RG+CP+ T+ I G C
Sbjct: 204 FDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCR 263
Query: 55 NGETDFAFEIFRSV 14
G D A + S+
Sbjct: 264 KGAIDEAARLLESI 277
>ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 109 bits (272), Expect = 3e-22
Identities = 50/81 (61%), Positives = 64/81 (79%)
Frame = -1
Query: 244 METFKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALING 65
++TFKAMLEKGC PNII+YNILIES C+DRKV A+++ +EM+ RGL PD VT LI G
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575
Query: 64 FCENGETDFAFEIFRSVEKQY 2
C NGE D A+E+F ++EK+Y
Sbjct: 576 LCSNGELDKAYELFVTIEKEY 596
Score = 64.7 bits (156), Expect = 7e-09
Identities = 25/70 (35%), Positives = 45/70 (64%)
Frame = -1
Query: 223 LEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGFCENGET 44
+ KGC P+I ++N LI+ C+ R + +AI++L M + G+ PD +TY L+NG C+ +
Sbjct: 453 IAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKL 512
Query: 43 DFAFEIFRSV 14
D + F+++
Sbjct: 513 DNVVDTFKAM 522
Score = 63.2 bits (152), Expect = 2e-08
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = -1
Query: 244 METFKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALING 65
+E ML G P++I+YN L+ LC+ RK+ +D + M +G P+ +TY LI
Sbjct: 481 IEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIES 540
Query: 64 FCENGETDFAFEIFRSVE 11
FC++ + A E+F+ ++
Sbjct: 541 FCKDRKVSEAMELFKEMK 558
Score = 56.6 bits (135), Expect = 2e-06
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = -1
Query: 232 KAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGFCEN 53
++++ +G P++ISYN LI C+ K+ A L +M N G+ P++ TY +INGFC+
Sbjct: 275 ESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKA 334
Query: 52 GETDFAFEIFR 20
G A +I R
Sbjct: 335 GMMQNADKILR 345
Score = 56.6 bits (135), Expect = 2e-06
Identities = 25/73 (34%), Positives = 43/73 (58%)
Frame = -1
Query: 244 METFKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALING 65
++ K M+E GC+P+I +YN+++ LC+ + A +L + +G PD T+ LI+G
Sbjct: 411 LQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDG 470
Query: 64 FCENGETDFAFEI 26
+C+ D A EI
Sbjct: 471 YCKQRNMDKAIEI 483
Score = 56.2 bits (134), Expect = 3e-06
Identities = 22/63 (34%), Positives = 40/63 (63%)
Frame = -1
Query: 235 FKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGFCE 56
F ++++G PN+ ++NI I+ LCR + A +L+ + + GL PD ++Y LI GFC+
Sbjct: 239 FSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK 298
Query: 55 NGE 47
+ +
Sbjct: 299 HSK 301
Score = 55.8 bits (133), Expect = 3e-06
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = -1
Query: 226 MLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGFCENGE 47
M+ G PN +YN +I C+ ++ A +L++ +G PD+ TY +LING C +G+
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371
Query: 46 TDFAFEIF-RSVEKQY 2
+ A +F ++EK +
Sbjct: 372 MNRAMAVFYEAMEKGF 387
Score = 54.7 bits (130), Expect = 8e-06
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = -1
Query: 235 FKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGFCE 56
F ML++G P+I+++N LI LC+ V+ + + ++ RG+CP+ T+ I G C
Sbjct: 204 FDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCR 263
Query: 55 NGETDFAFEIFRSV 14
G D A + S+
Sbjct: 264 KGAIDEAARLLESI 277
>ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein
MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 108 bits (271), Expect = 3e-22
Identities = 49/81 (60%), Positives = 64/81 (79%)
Frame = -1
Query: 244 METFKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALING 65
ME FKAM EKGCAPNII+YN +IESLC +KV A+D+L EM+++GL PD V++G LI G
Sbjct: 595 MEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITG 654
Query: 64 FCENGETDFAFEIFRSVEKQY 2
FC+ G+ D A+ +FR +EKQY
Sbjct: 655 FCKVGDLDGAYGLFRGMEKQY 675
Score = 68.6 bits (166), Expect = 5e-10
Identities = 26/73 (35%), Positives = 49/73 (67%)
Frame = -1
Query: 223 LEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGFCENGET 44
+ KGC P+I +YN L++ CR K+ AI+++ M ++G+ PD +TY L+NG C+ ++
Sbjct: 532 ITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKS 591
Query: 43 DFAFEIFRSVEKQ 5
+ EIF+++ ++
Sbjct: 592 EEVMEIFKAMTEK 604
Score = 57.8 bits (138), Expect = 9e-07
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = -1
Query: 241 ETFKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGF 62
E M+ G PN +YN +I+ C+ V A +L++ +G PD+ TY +L+NGF
Sbjct: 386 ECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGF 445
Query: 61 CENGETDFAFEIFR 20
C++G+ D A +F+
Sbjct: 446 CQDGDPDQAMAVFK 459
Score = 57.4 bits (137), Expect = 1e-06
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = -1
Query: 244 METFKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALING 65
M FK L KG P+II YN LI+ LC+ + A+ ++ EM +G PD TY +ING
Sbjct: 455 MAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIING 514
Query: 64 FCENG 50
C+ G
Sbjct: 515 LCKMG 519
>ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera] gi|297733985|emb|CBI15232.3|
unnamed protein product [Vitis vinifera]
Length = 764
Score = 108 bits (270), Expect = 4e-22
Identities = 45/81 (55%), Positives = 66/81 (81%)
Frame = -1
Query: 244 METFKAMLEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALING 65
M TFK M+EKGC PNII+YNIL ES C+ RKV+ A+++++EM+N+GL PD V +G L+ G
Sbjct: 515 MGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKG 574
Query: 64 FCENGETDFAFEIFRSVEKQY 2
FC+NG+ D A+++F+ V++QY
Sbjct: 575 FCDNGDLDGAYQLFKRVDEQY 595
Score = 57.4 bits (137), Expect = 1e-06
Identities = 22/68 (32%), Positives = 42/68 (61%)
Frame = -1
Query: 223 LEKGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGFCENGET 44
+ KG P++ ++N LI+ C+ K+ AI+++ M N G+ PD +TY +++NG C+ G+
Sbjct: 452 IAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKY 511
Query: 43 DFAFEIFR 20
+ F+
Sbjct: 512 EDVMGTFK 519
Score = 55.8 bits (133), Expect = 3e-06
Identities = 27/66 (40%), Positives = 41/66 (62%)
Frame = -1
Query: 217 KGCAPNIISYNILIESLCRDRKVKRAIDVLQEMENRGLCPDDVTYGALINGFCENGETDF 38
+G P++I+YN LI LC++ KV A L++M N G PD TY ++I+G+C+ G
Sbjct: 279 RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQN 338
Query: 37 AFEIFR 20
A +I R
Sbjct: 339 ADQILR 344