BLASTX nr result

ID: Lithospermum22_contig00038192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038192
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16
ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-16
emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]    81   8e-14
ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
emb|CBI39966.3| unnamed protein product [Vitis vinifera]               80   2e-13

>ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/77 (53%), Positives = 58/77 (75%)
 Frame = -2

Query: 232 MNHNSLSTKALDFYTQMKKLKIEPDEYTFPSVINASSSLLNLKLGQCIHCDVFLMGFQSD 53
           + HN L T+AL +YT+M++ K++PD +TFPSVIN+ + +L+L+LG  +H     MGF+SD
Sbjct: 96  LTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESD 155

Query: 52  LYICNALIGMYSRLIKL 2
           LYI NALI MYSR + L
Sbjct: 156 LYIGNALIDMYSRFVDL 172


>ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/77 (53%), Positives = 58/77 (75%)
 Frame = -2

Query: 232 MNHNSLSTKALDFYTQMKKLKIEPDEYTFPSVINASSSLLNLKLGQCIHCDVFLMGFQSD 53
           + HN L T+AL +YT+M++ K++PD +TFPSVIN+ + +L+L+LG  +H     MGF+SD
Sbjct: 96  LTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESD 155

Query: 52  LYICNALIGMYSRLIKL 2
           LYI NALI MYSR + L
Sbjct: 156 LYIGNALIDMYSRFVDL 172


>emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/73 (50%), Positives = 53/73 (72%)
 Frame = -2

Query: 232 MNHNSLSTKALDFYTQMKKLKIEPDEYTFPSVINASSSLLNLKLGQCIHCDVFLMGFQSD 53
           + HN L ++AL  Y++ ++++++PD YTFPSVINA + LL+ ++ + IH  V  MGF SD
Sbjct: 149 LTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSD 208

Query: 52  LYICNALIGMYSR 14
           LYI NALI MY R
Sbjct: 209 LYIGNALIDMYCR 221


>ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/73 (50%), Positives = 53/73 (72%)
 Frame = -2

Query: 232 MNHNSLSTKALDFYTQMKKLKIEPDEYTFPSVINASSSLLNLKLGQCIHCDVFLMGFQSD 53
           + HN L ++AL  Y++ ++++++PD YTFPSVINA + LL+ ++ + IH  V  MGF SD
Sbjct: 90  LTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSD 149

Query: 52  LYICNALIGMYSR 14
           LYI NALI MY R
Sbjct: 150 LYIGNALIDMYCR 162


>emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/73 (50%), Positives = 53/73 (72%)
 Frame = -2

Query: 232 MNHNSLSTKALDFYTQMKKLKIEPDEYTFPSVINASSSLLNLKLGQCIHCDVFLMGFQSD 53
           + HN L ++AL  Y++ ++++++PD YTFPSVINA + LL+ ++ + IH  V  MGF SD
Sbjct: 90  LTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSD 149

Query: 52  LYICNALIGMYSR 14
           LYI NALI MY R
Sbjct: 150 LYIGNALIDMYCR 162


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