BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038142
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...    64   2e-21
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    63   3e-19
gb|AAB84340.1| putative non-LTR retroelement reverse transcripta...    62   2e-18
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    67   2e-18
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta...    62   3e-18

>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score = 64.3 bits (155), Expect(2) = 2e-21
 Identities = 27/48 (56%), Positives = 39/48 (81%)
 Frame = -1

Query: 145 DYRPISLCNIVAKIIGRVLTNRLRSVLMGIISEYQSAFLPGHIISDNI 2
           DYRPI+LCNI  KI+ +++T R++ +L  +ISE QSAF+PG +ISDN+
Sbjct: 398 DYRPIALCNIFYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISDNV 445



 Score = 62.8 bits (151), Expect(2) = 2e-21
 Identities = 32/85 (37%), Positives = 48/85 (56%)
 Frame = -2

Query: 426 QSVDRRVTDEMNQQLTRVVSFEEVKRAVFEMPVDKSLGPDGMTITFFPSCWHIISTYIVN 247
           ++++  V+   N  LTR+ + EEVK AVF +   K+ GPDG T  F+ S WHIIST +  
Sbjct: 305 EAIEPMVSQGDNDFLTRIPNDEEVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTDVGR 364

Query: 246 DVDXXXXXXXXXXSVNSTYVRSIPK 172
           ++            +N T++R IPK
Sbjct: 365 EIRLFFTSKNFPRRMNETHIRLIPK 389


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 63.2 bits (152), Expect(2) = 3e-19
 Identities = 33/85 (38%), Positives = 47/85 (55%)
 Frame = -2

Query: 426 QSVDRRVTDEMNQQLTRVVSFEEVKRAVFEMPVDKSLGPDGMTITFFPSCWHIISTYIVN 247
           Q V   +T+EMN+ LT+V+S EEVKRA+F +  DK+ GPDGMT  F+   W +    ++ 
Sbjct: 357 QEVPVLITEEMNKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWDLTGPDLIK 416

Query: 246 DVDXXXXXXXXXXSVNSTYVRSIPK 172
            V            +N T +  IPK
Sbjct: 417 LVQNFHSTGFFDERLNETNICLIPK 441



 Score = 56.6 bits (135), Expect(2) = 3e-19
 Identities = 26/50 (52%), Positives = 39/50 (78%)
 Frame = -1

Query: 151 MIDYRPISLCNIVAKIIGRVLTNRLRSVLMGIISEYQSAFLPGHIISDNI 2
           M ++RPISLCN+  K+I +VL++RL+ +L  +ISE QSAF+   +I+DNI
Sbjct: 448 MAEFRPISLCNVSYKVISKVLSSRLKRLLPELISETQSAFVAERLITDNI 497


>gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1094

 Score = 62.0 bits (149), Expect(2) = 2e-18
 Identities = 28/85 (32%), Positives = 49/85 (57%)
 Frame = -2

Query: 426 QSVDRRVTDEMNQQLTRVVSFEEVKRAVFEMPVDKSLGPDGMTITFFPSCWHIISTYIVN 247
           +  ++RVT++MNQ LT+ V+ +E+ +AVF +  + + GPDG T  FF   W ++   I++
Sbjct: 139 EGFNKRVTEDMNQDLTKKVNEQEIYKAVFSINAESAPGPDGFTALFFQRQWPLVKNQIIS 198

Query: 246 DVDXXXXXXXXXXSVNSTYVRSIPK 172
           D++            N T++  IPK
Sbjct: 199 DIELFFQTGILPEDWNHTHLCLIPK 223



 Score = 55.5 bits (132), Expect(2) = 2e-18
 Identities = 29/65 (44%), Positives = 42/65 (64%)
 Frame = -1

Query: 196 HLCPLDSKKKASLLNMIDYRPISLCNIVAKIIGRVLTNRLRSVLMGIISEYQSAFLPGHI 17
           HLC +    K +   M D RPISLC+++ KII ++L+ RL+  L  I+S  QSAF+   +
Sbjct: 217 HLCLIPKITKPA--RMADIRPISLCSVMYKIISKILSARLKKYLPVIVSPTQSAFVAERL 274

Query: 16  ISDNI 2
           +SDNI
Sbjct: 275 VSDNI 279


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 67.0 bits (162), Expect(2) = 2e-18
 Identities = 33/82 (40%), Positives = 48/82 (58%)
 Frame = -2

Query: 411 RVTDEMNQQLTRVVSFEEVKRAVFEMPVDKSLGPDGMTITFFPSCWHIISTYIVNDVDXX 232
           R +++ ++ LTRVV+ EE+K+ +F MP DKS GPDG T  F+ + W II   ++  +   
Sbjct: 161 RCSEDDHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSF 220

Query: 231 XXXXXXXXSVNSTYVRSIPKKK 166
                    VNST +  IPKKK
Sbjct: 221 FAKGFLPKGVNSTILALIPKKK 242



 Score = 50.1 bits (118), Expect(2) = 2e-18
 Identities = 23/57 (40%), Positives = 35/57 (61%)
 Frame = -1

Query: 172 KKASLLNMIDYRPISLCNIVAKIIGRVLTNRLRSVLMGIISEYQSAFLPGHIISDNI 2
           KK     + DYRPIS CN++ K I ++L NRL+ +L   I   QSAF+   ++ +N+
Sbjct: 240 KKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENV 296


>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 977

 Score = 62.0 bits (149), Expect(2) = 3e-18
 Identities = 34/81 (41%), Positives = 42/81 (51%)
 Frame = -2

Query: 411 RVTDEMNQQLTRVVSFEEVKRAVFEMPVDKSLGPDGMTITFFPSCWHIISTYIVNDVDXX 232
           +V +E    LT  V+ EE+KR VF MP DKSLGPDG    F+ + W II    V  +   
Sbjct: 555 KVAEEDKGMLTTEVTKEEIKRVVFSMPKDKSLGPDGYRTEFYKATWDIIGEEFVLAIKSF 614

Query: 231 XXXXXXXXSVNSTYVRSIPKK 169
                    VNST +  IPKK
Sbjct: 615 FEKGFLPKGVNSTILALIPKK 635



 Score = 54.7 bits (130), Expect(2) = 3e-18
 Identities = 23/57 (40%), Positives = 38/57 (66%)
 Frame = -1

Query: 172 KKASLLNMIDYRPISLCNIVAKIIGRVLTNRLRSVLMGIISEYQSAFLPGHIISDNI 2
           KK   + M DYRPIS CN++ K+I +++ NRL+ +L   I+  QSAF+   ++ +N+
Sbjct: 634 KKLEEIEMKDYRPISCCNVIYKVISKIIANRLKRLLPNFIAGNQSAFVQDRLLLENL 690