BLASTX nr result
ID: Lithospermum22_contig00038142
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00038142 (487 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 64 2e-21 gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 63 3e-19 gb|AAB84340.1| putative non-LTR retroelement reverse transcripta... 62 2e-18 gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 67 2e-18 gb|AAD24652.1| putative non-LTR retroelement reverse transcripta... 62 3e-18 >gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1229 Score = 64.3 bits (155), Expect(2) = 2e-21 Identities = 27/48 (56%), Positives = 39/48 (81%) Frame = -1 Query: 145 DYRPISLCNIVAKIIGRVLTNRLRSVLMGIISEYQSAFLPGHIISDNI 2 DYRPI+LCNI KI+ +++T R++ +L +ISE QSAF+PG +ISDN+ Sbjct: 398 DYRPIALCNIFYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISDNV 445 Score = 62.8 bits (151), Expect(2) = 2e-21 Identities = 32/85 (37%), Positives = 48/85 (56%) Frame = -2 Query: 426 QSVDRRVTDEMNQQLTRVVSFEEVKRAVFEMPVDKSLGPDGMTITFFPSCWHIISTYIVN 247 ++++ V+ N LTR+ + EEVK AVF + K+ GPDG T F+ S WHIIST + Sbjct: 305 EAIEPMVSQGDNDFLTRIPNDEEVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTDVGR 364 Query: 246 DVDXXXXXXXXXXSVNSTYVRSIPK 172 ++ +N T++R IPK Sbjct: 365 EIRLFFTSKNFPRRMNETHIRLIPK 389 >gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1225 Score = 63.2 bits (152), Expect(2) = 3e-19 Identities = 33/85 (38%), Positives = 47/85 (55%) Frame = -2 Query: 426 QSVDRRVTDEMNQQLTRVVSFEEVKRAVFEMPVDKSLGPDGMTITFFPSCWHIISTYIVN 247 Q V +T+EMN+ LT+V+S EEVKRA+F + DK+ GPDGMT F+ W + ++ Sbjct: 357 QEVPVLITEEMNKSLTKVISPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWDLTGPDLIK 416 Query: 246 DVDXXXXXXXXXXSVNSTYVRSIPK 172 V +N T + IPK Sbjct: 417 LVQNFHSTGFFDERLNETNICLIPK 441 Score = 56.6 bits (135), Expect(2) = 3e-19 Identities = 26/50 (52%), Positives = 39/50 (78%) Frame = -1 Query: 151 MIDYRPISLCNIVAKIIGRVLTNRLRSVLMGIISEYQSAFLPGHIISDNI 2 M ++RPISLCN+ K+I +VL++RL+ +L +ISE QSAF+ +I+DNI Sbjct: 448 MAEFRPISLCNVSYKVISKVLSSRLKRLLPELISETQSAFVAERLITDNI 497 >gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1094 Score = 62.0 bits (149), Expect(2) = 2e-18 Identities = 28/85 (32%), Positives = 49/85 (57%) Frame = -2 Query: 426 QSVDRRVTDEMNQQLTRVVSFEEVKRAVFEMPVDKSLGPDGMTITFFPSCWHIISTYIVN 247 + ++RVT++MNQ LT+ V+ +E+ +AVF + + + GPDG T FF W ++ I++ Sbjct: 139 EGFNKRVTEDMNQDLTKKVNEQEIYKAVFSINAESAPGPDGFTALFFQRQWPLVKNQIIS 198 Query: 246 DVDXXXXXXXXXXSVNSTYVRSIPK 172 D++ N T++ IPK Sbjct: 199 DIELFFQTGILPEDWNHTHLCLIPK 223 Score = 55.5 bits (132), Expect(2) = 2e-18 Identities = 29/65 (44%), Positives = 42/65 (64%) Frame = -1 Query: 196 HLCPLDSKKKASLLNMIDYRPISLCNIVAKIIGRVLTNRLRSVLMGIISEYQSAFLPGHI 17 HLC + K + M D RPISLC+++ KII ++L+ RL+ L I+S QSAF+ + Sbjct: 217 HLCLIPKITKPA--RMADIRPISLCSVMYKIISKILSARLKKYLPVIVSPTQSAFVAERL 274 Query: 16 ISDNI 2 +SDNI Sbjct: 275 VSDNI 279 >gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1216 Score = 67.0 bits (162), Expect(2) = 2e-18 Identities = 33/82 (40%), Positives = 48/82 (58%) Frame = -2 Query: 411 RVTDEMNQQLTRVVSFEEVKRAVFEMPVDKSLGPDGMTITFFPSCWHIISTYIVNDVDXX 232 R +++ ++ LTRVV+ EE+K+ +F MP DKS GPDG T F+ + W II ++ + Sbjct: 161 RCSEDDHRLLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSF 220 Query: 231 XXXXXXXXSVNSTYVRSIPKKK 166 VNST + IPKKK Sbjct: 221 FAKGFLPKGVNSTILALIPKKK 242 Score = 50.1 bits (118), Expect(2) = 2e-18 Identities = 23/57 (40%), Positives = 35/57 (61%) Frame = -1 Query: 172 KKASLLNMIDYRPISLCNIVAKIIGRVLTNRLRSVLMGIISEYQSAFLPGHIISDNI 2 KK + DYRPIS CN++ K I ++L NRL+ +L I QSAF+ ++ +N+ Sbjct: 240 KKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENV 296 >gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 977 Score = 62.0 bits (149), Expect(2) = 3e-18 Identities = 34/81 (41%), Positives = 42/81 (51%) Frame = -2 Query: 411 RVTDEMNQQLTRVVSFEEVKRAVFEMPVDKSLGPDGMTITFFPSCWHIISTYIVNDVDXX 232 +V +E LT V+ EE+KR VF MP DKSLGPDG F+ + W II V + Sbjct: 555 KVAEEDKGMLTTEVTKEEIKRVVFSMPKDKSLGPDGYRTEFYKATWDIIGEEFVLAIKSF 614 Query: 231 XXXXXXXXSVNSTYVRSIPKK 169 VNST + IPKK Sbjct: 615 FEKGFLPKGVNSTILALIPKK 635 Score = 54.7 bits (130), Expect(2) = 3e-18 Identities = 23/57 (40%), Positives = 38/57 (66%) Frame = -1 Query: 172 KKASLLNMIDYRPISLCNIVAKIIGRVLTNRLRSVLMGIISEYQSAFLPGHIISDNI 2 KK + M DYRPIS CN++ K+I +++ NRL+ +L I+ QSAF+ ++ +N+ Sbjct: 634 KKLEEIEMKDYRPISCCNVIYKVISKIIANRLKRLLPNFIAGNQSAFVQDRLLLENL 690