BLASTX nr result

ID: Lithospermum22_contig00038139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00038139
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510620.1| pentatricopeptide repeat-containing protein,...   106   2e-21
ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|XP_002318942.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   102   2e-20
ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   102   2e-20

>ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551321|gb|EEF52807.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 708

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/72 (68%), Positives = 62/72 (86%)
 Frame = -2

Query: 261 IYSAMGKLDDVERVRKLMSLRGVSKEPGCSWIELRSHVHVFVVGDLLHPLIEDIRTEIRR 82
           IY+A+G+ +DVERVR +M +RGVSKEPGCSWIEL+S+VHVFVVGD +HP I +IRTEI R
Sbjct: 626 IYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEILR 685

Query: 81  LTELMKDEASRP 46
           L++ MKDE  +P
Sbjct: 686 LSKQMKDEGYQP 697


>ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera] gi|302141693|emb|CBI18896.3| unnamed
           protein product [Vitis vinifera]
          Length = 703

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/76 (64%), Positives = 61/76 (80%)
 Frame = -2

Query: 261 IYSAMGKLDDVERVRKLMSLRGVSKEPGCSWIELRSHVHVFVVGDLLHPLIEDIRTEIRR 82
           IYSA+G+ +DVERVR++M LRGVSKEPGCSWIEL+S VHVFVV D +HP I DI  E+R+
Sbjct: 623 IYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQMHPQIGDIHVELRQ 682

Query: 81  LTELMKDEASRPDYES 34
           L++ MKDE   P  +S
Sbjct: 683 LSKQMKDEGYEPATDS 698


>ref|XP_002318942.1| predicted protein [Populus trichocarpa] gi|222857318|gb|EEE94865.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/76 (64%), Positives = 61/76 (80%)
 Frame = -2

Query: 261 IYSAMGKLDDVERVRKLMSLRGVSKEPGCSWIELRSHVHVFVVGDLLHPLIEDIRTEIRR 82
           IY+AMG+L DV RVR++M +RGV KE GCSWIEL+SHVHVFVVGD +HP IE+I+  I R
Sbjct: 627 IYTAMGRLADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVGDQIHPQIEEIQGAIWR 686

Query: 81  LTELMKDEASRPDYES 34
           L + MKD+  RP +ES
Sbjct: 687 LRKHMKDDGYRPGHES 702


>ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  102 bits (255), Expect = 2e-20
 Identities = 51/76 (67%), Positives = 61/76 (80%)
 Frame = -2

Query: 261 IYSAMGKLDDVERVRKLMSLRGVSKEPGCSWIELRSHVHVFVVGDLLHPLIEDIRTEIRR 82
           IY+A+G+ DDVERVR+LM LRGV+KEPGCSWIEL+S VHVFVVGD +HP I  I +E+RR
Sbjct: 628 IYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRR 687

Query: 81  LTELMKDEASRPDYES 34
           L + MKDE     YES
Sbjct: 688 LRDHMKDEC----YES 699


>ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  102 bits (255), Expect = 2e-20
 Identities = 51/76 (67%), Positives = 61/76 (80%)
 Frame = -2

Query: 261 IYSAMGKLDDVERVRKLMSLRGVSKEPGCSWIELRSHVHVFVVGDLLHPLIEDIRTEIRR 82
           IY+A+G+ DDVERVR+LM LRGV+KEPGCSWIEL+S VHVFVVGD +HP I  I +E+RR
Sbjct: 610 IYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRR 669

Query: 81  LTELMKDEASRPDYES 34
           L + MKDE     YES
Sbjct: 670 LRDHMKDEC----YES 681


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