BLASTX nr result
ID: Lithospermum22_contig00038120
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00038120 (237 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor... 61 1e-07 ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor... 61 1e-07 ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor... 56 3e-06 >ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase-like [Vitis vinifera] Length = 1172 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 4/57 (7%) Frame = -3 Query: 235 IIHAILPPKSKSENDTKR----DEKKAGFSALNIADNKDRVREIEKEIELEMRGKRK 77 IIHAILPPK KS++ + D KK+ F AL I D+K+RVRE+E+EIE+E R +R+ Sbjct: 76 IIHAILPPKPKSDDKGMKKDGGDGKKSKFPALGIGDSKERVRELEREIEIESRDRRR 132 >ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase-like isoform 2 [Vitis vinifera] Length = 1175 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 4/57 (7%) Frame = -3 Query: 235 IIHAILPPKSKSENDTKR----DEKKAGFSALNIADNKDRVREIEKEIELEMRGKRK 77 IIHAILPPK KS++ + D KK+ F AL I D+K+RVRE+E+EIE+E R +R+ Sbjct: 76 IIHAILPPKPKSDDKGMKKDGGDGKKSKFPALGIGDSKERVRELEREIEIESRDRRR 132 >ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase-like [Glycine max] Length = 1203 Score = 56.2 bits (134), Expect = 3e-06 Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 5/58 (8%) Frame = -3 Query: 235 IIHAILPPKSKSENDTKRDE-----KKAGFSALNIADNKDRVREIEKEIELEMRGKRK 77 IIHAILPPKSK D+K+++ K F AL IADN+DR +E++KE+E E R K+K Sbjct: 76 IIHAILPPKSK---DSKKEKDSVSGKTTKFKALAIADNRDRAKELQKELESEAREKQK 130