BLASTX nr result

ID: Lithospermum22_contig00037992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037992
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinu...   149   2e-34
ref|XP_003527293.1| PREDICTED: glutamate receptor 3.3-like [Glyc...   142   2e-32
ref|XP_002301908.1| glutamate-gated kainate-type ion channel rec...   142   3e-32
ref|XP_004145549.1| PREDICTED: glutamate receptor 3.3-like [Cucu...   140   8e-32
dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]         140   1e-31

>ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinus communis]
           gi|223551404|gb|EEF52890.1| glutamate receptor 3 plant,
           putative [Ricinus communis]
          Length = 927

 Score =  149 bits (377), Expect = 2e-34
 Identities = 69/93 (74%), Positives = 80/93 (86%)
 Frame = +3

Query: 6   LLKNILQSDFIGLTGAVKFDSDRSLINPAYDIMNVVGTGFHRIGYWSNYSGLSTVLPEEL 185
           LLKNILQSDF+GLTG VKFDS +SLI PAYDI+NV+GTGF +IG+WSNYSGLS VLPE L
Sbjct: 370 LLKNILQSDFVGLTGRVKFDSQKSLILPAYDIINVIGTGFRQIGFWSNYSGLSIVLPETL 429

Query: 186 YTMPPNLSNANQVLKPVVWPGDTVDIPRGWSFP 284
           YT PPN S+ANQ L+ V+WPG+T+  PRGW FP
Sbjct: 430 YTRPPNRSSANQQLQSVIWPGETLLKPRGWVFP 462


>ref|XP_003527293.1| PREDICTED: glutamate receptor 3.3-like [Glycine max]
          Length = 929

 Score =  142 bits (359), Expect = 2e-32
 Identities = 63/94 (67%), Positives = 77/94 (81%)
 Frame = +3

Query: 3   LLLKNILQSDFIGLTGAVKFDSDRSLINPAYDIMNVVGTGFHRIGYWSNYSGLSTVLPEE 182
           LLLKNILQSDF+GL+G +KF+ DRSL++PAY+++NVVG G  R+GYWSNYSGLS V PE 
Sbjct: 372 LLLKNILQSDFVGLSGRMKFEPDRSLVHPAYEVLNVVGNGLRRVGYWSNYSGLSIVTPEI 431

Query: 183 LYTMPPNLSNANQVLKPVVWPGDTVDIPRGWSFP 284
           LY  PPN S+ANQ L  V+WPG+T+  PRGW FP
Sbjct: 432 LYAKPPNRSSANQKLYSVIWPGETLSKPRGWVFP 465


>ref|XP_002301908.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222843634|gb|EEE81181.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 859

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/93 (70%), Positives = 76/93 (81%)
 Frame = +3

Query: 3   LLLKNILQSDFIGLTGAVKFDSDRSLINPAYDIMNVVGTGFHRIGYWSNYSGLSTVLPEE 182
           LLL NILQS+ +GLTG +KFD+DRSLI PAYD+ NV GTGF RIGYWSNYSGL+ V PE 
Sbjct: 361 LLLNNILQSNLVGLTGRIKFDTDRSLILPAYDVNNVFGTGFKRIGYWSNYSGLTVVPPEI 420

Query: 183 LYTMPPNLSNANQVLKPVVWPGDTVDIPRGWSF 281
           LYT PPN S+ANQ L  V+WPGDT+  PRGW+F
Sbjct: 421 LYTKPPNRSSANQELYKVIWPGDTLFTPRGWAF 453


>ref|XP_004145549.1| PREDICTED: glutamate receptor 3.3-like [Cucumis sativus]
           gi|449485091|ref|XP_004157067.1| PREDICTED: glutamate
           receptor 3.3-like [Cucumis sativus]
          Length = 918

 Score =  140 bits (354), Expect = 8e-32
 Identities = 63/93 (67%), Positives = 77/93 (82%)
 Frame = +3

Query: 6   LLKNILQSDFIGLTGAVKFDSDRSLINPAYDIMNVVGTGFHRIGYWSNYSGLSTVLPEEL 185
           +L NIL+SDF+GLTGA+KFD DRSLI+PAYDI+NV+GTG  R+GYWSNYSGLS   PE L
Sbjct: 370 VLNNILESDFVGLTGAIKFDLDRSLIHPAYDIINVIGTGSRRVGYWSNYSGLSIDAPELL 429

Query: 186 YTMPPNLSNANQVLKPVVWPGDTVDIPRGWSFP 284
           Y+ P N S+ANQ L  V+WPG+T++ PRGW FP
Sbjct: 430 YSKPANRSHANQKLYEVIWPGNTIEQPRGWVFP 462


>dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]
          Length = 808

 Score =  140 bits (352), Expect = 1e-31
 Identities = 63/94 (67%), Positives = 74/94 (78%)
 Frame = +3

Query: 3   LLLKNILQSDFIGLTGAVKFDSDRSLINPAYDIMNVVGTGFHRIGYWSNYSGLSTVLPEE 182
           LLLKN+L+SDF+GLTG  KF  D+SLI PAYDI+NV+GTGF R+GYWSNYSGLS + PE 
Sbjct: 374 LLLKNLLESDFVGLTGPFKFSPDKSLIRPAYDIINVIGTGFRRVGYWSNYSGLSILPPET 433

Query: 183 LYTMPPNLSNANQVLKPVVWPGDTVDIPRGWSFP 284
            Y+ PPN S+ NQ L  VVWPG+ V  PRGW FP
Sbjct: 434 YYSRPPNRSSTNQKLYSVVWPGNNVQKPRGWVFP 467


Top