BLASTX nr result

ID: Lithospermum22_contig00037970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037970
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]   148   5e-34
ref|XP_002515341.1| pentatricopeptide repeat-containing protein,...   136   2e-30
ref|XP_002330763.1| predicted protein [Populus trichocarpa] gi|2...   131   7e-29
ref|XP_002330760.1| predicted protein [Populus trichocarpa] gi|2...   131   7e-29

>ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g10690-like [Vitis vinifera]
          Length = 609

 Score =  150 bits (378), Expect = 1e-34
 Identities = 70/113 (61%), Positives = 89/113 (78%)
 Frame = +3

Query: 3   PLHANAKLEQVIMRFYKDPVVPITDTWGSCVGILHREDCNKLDAPLSDMMRSPPPWVKMS 182
           PL A   L++V+MRFYKD VVP+ D WGSCVG+LHREDC +LDAP+S MMRSPPP V  +
Sbjct: 476 PLLATLDLKRVVMRFYKDSVVPVIDDWGSCVGLLHREDCRELDAPVSTMMRSPPPCVTTT 535

Query: 183 TSVGRVIDLMLAKKYKMIIIAKHGDLPGIFYGSSVRAVGVFTFEKLCKLTLPS 341
           TS+GRV DL+L K+YKM+++ K+ +L G  Y SS+RAVGVFT E+L KL + S
Sbjct: 536 TSIGRVADLILEKRYKMVVVVKYSNLYGSSYSSSLRAVGVFTSEQLFKLAIAS 588


>emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]
          Length = 1120

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/113 (61%), Positives = 88/113 (77%)
 Frame = +3

Query: 3   PLHANAKLEQVIMRFYKDPVVPITDTWGSCVGILHREDCNKLDAPLSDMMRSPPPWVKMS 182
           PL A   L++V+MRFYKD VVP+ D WGSCVG+LH EDC +LDAP+S MMRSPPP V  +
Sbjct: 450 PLLATLDLKRVVMRFYKDSVVPVIDDWGSCVGLLHHEDCRELDAPVSTMMRSPPPCVTTT 509

Query: 183 TSVGRVIDLMLAKKYKMIIIAKHGDLPGIFYGSSVRAVGVFTFEKLCKLTLPS 341
           TS+GRV DL+L K+YKM+++ K+ +L G  Y SS+RAVGVFT E+L KL + S
Sbjct: 510 TSIGRVADLILEKRYKMVVVVKYSNLYGSSYSSSLRAVGVFTSEQLFKLAMAS 562


>ref|XP_002515341.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545285|gb|EEF46790.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 600

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/114 (57%), Positives = 86/114 (75%)
 Frame = +3

Query: 3   PLHANAKLEQVIMRFYKDPVVPITDTWGSCVGILHREDCNKLDAPLSDMMRSPPPWVKMS 182
           PL    +L++V+MRF++D VVPI D WG+C+G+LHREDC +L+A L+ MMRSPPP V   
Sbjct: 469 PLLGTLELKKVVMRFFRDEVVPIMDDWGNCIGLLHREDCTELNATLATMMRSPPPCVTTM 528

Query: 183 TSVGRVIDLMLAKKYKMIIIAKHGDLPGIFYGSSVRAVGVFTFEKLCKLTLPSS 344
           TS+G V+DL+L KKY+M+++ K+ +L  I Y SS RAVGVFT EKL KL  P S
Sbjct: 529 TSIGHVVDLILDKKYRMVVVIKYSNLDSITYSSS-RAVGVFTAEKLYKLAKPVS 581


>ref|XP_002330763.1| predicted protein [Populus trichocarpa] gi|222872565|gb|EEF09696.1|
           predicted protein [Populus trichocarpa]
          Length = 242

 Score =  131 bits (329), Expect = 7e-29
 Identities = 61/117 (52%), Positives = 82/117 (70%)
 Frame = +3

Query: 3   PLHANAKLEQVIMRFYKDPVVPITDTWGSCVGILHREDCNKLDAPLSDMMRSPPPWVKMS 182
           PL     L++V+MRF+ D VVPI D WGSCVG+LHREDC +L+APL  MMRSPPP V  +
Sbjct: 110 PLLGTLHLKKVVMRFFWDQVVPIVDDWGSCVGLLHREDCTELNAPLMTMMRSPPPCVTTT 169

Query: 183 TSVGRVIDLMLAKKYKMIIIAKHGDLPGIFYGSSVRAVGVFTFEKLCKLTLPSSREM 353
           TS+G V+DL+L K Y+M+++ K+ +L      S  + VGVFT E+L KL +P  R +
Sbjct: 170 TSIGHVVDLILEKMYRMVVVVKYSNLNSSTNSSGSKTVGVFTAEQLFKLVVPVQRPL 226


>ref|XP_002330760.1| predicted protein [Populus trichocarpa] gi|222872562|gb|EEF09693.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  131 bits (329), Expect = 7e-29
 Identities = 61/117 (52%), Positives = 82/117 (70%)
 Frame = +3

Query: 3   PLHANAKLEQVIMRFYKDPVVPITDTWGSCVGILHREDCNKLDAPLSDMMRSPPPWVKMS 182
           PL     L++V+MRF+ D VVPI D WGSCVG+LHREDC +L+APL  MMRSPPP V  +
Sbjct: 475 PLLGTLHLKKVVMRFFWDQVVPIVDDWGSCVGLLHREDCTELNAPLMTMMRSPPPCVTTT 534

Query: 183 TSVGRVIDLMLAKKYKMIIIAKHGDLPGIFYGSSVRAVGVFTFEKLCKLTLPSSREM 353
           TS+G V+DL+L K Y+M+++ K+ +L      S  + VGVFT E+L KL +P  R +
Sbjct: 535 TSIGHVVDLILEKMYRMVVVVKYSNLNSSTNSSGSKTVGVFTTEQLFKLVVPVQRPL 591


Top