BLASTX nr result

ID: Lithospermum22_contig00037904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037904
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD30905.1| putative RF1 protein [Ehretia acuminata]               218   3e-55
ref|YP_004564062.1| Ycf1 protein [Olea woodiana subsp. woodiana]...   205   3e-51
emb|CBR23797.1| Ycf1 protein [Olea europaea subsp. cuspidata]         203   1e-50
ref|YP_004563839.1| Ycf1 protein [Olea europaea subsp. cuspidata...   203   1e-50
emb|CBR23889.1| Ycf1 protein [Olea europaea subsp. cuspidata]         203   1e-50

>gb|ADD30905.1| putative RF1 protein [Ehretia acuminata]
          Length = 1814

 Score =  218 bits (556), Expect = 3e-55
 Identities = 110/139 (79%), Positives = 121/139 (87%)
 Frame = +3

Query: 3    LFQLRWDDPLNQRIINNIKVYCLLLRLNNPRKITISSIQRGELCLDIMLIEQNLTFPELM 182
            LFQLRWDD LNQR+INNIKVYCLLLRL NPRKITISSIQR E+ LDIMLIE+NLT  ELM
Sbjct: 1573 LFQLRWDDSLNQRMINNIKVYCLLLRLINPRKITISSIQRREISLDIMLIEKNLTLTELM 1632

Query: 183  KKGLFIIEPTRVSVKNDGQFLMYQTIDISLVHKSKYKTSNQRYHEQGYMDKTHFNESISE 362
            KKG+ IIEP R+SVKNDGQF+MYQTI ISLVHKSK+K  NQ+Y EQ Y+DKTHF+ESIS 
Sbjct: 1633 KKGVLIIEPLRLSVKNDGQFIMYQTIGISLVHKSKHKKINQKYREQRYVDKTHFDESISR 1692

Query: 363  YQKIIRNRKKNDFDLLVPE 419
            YQKI  NR KN F+LLVPE
Sbjct: 1693 YQKINGNRYKNHFNLLVPE 1711


>ref|YP_004564062.1| Ycf1 protein [Olea woodiana subsp. woodiana]
            gi|334084717|emb|CBS29411.1| Ycf1 protein [Olea woodiana
            subsp. woodiana]
          Length = 1876

 Score =  205 bits (521), Expect = 3e-51
 Identities = 102/139 (73%), Positives = 120/139 (86%)
 Frame = +3

Query: 3    LFQLRWDDPLNQRIINNIKVYCLLLRLNNPRKITISSIQRGELCLDIMLIEQNLTFPELM 182
            LFQLRWDD LNQR+INNIKVYC LLRL +PRKI+ISSIQRGE+ LDIMLI++NLT PELM
Sbjct: 1639 LFQLRWDDTLNQRMINNIKVYCFLLRLIDPRKISISSIQRGEMSLDIMLIQKNLTLPELM 1698

Query: 183  KKGLFIIEPTRVSVKNDGQFLMYQTIDISLVHKSKYKTSNQRYHEQGYMDKTHFNESISE 362
            K+G+ IIEP R+SVKNDGQF+MYQTI I LVHKSK++T NQRY EQ Y+ K +F+ESI  
Sbjct: 1699 KRGILIIEPIRLSVKNDGQFIMYQTIGILLVHKSKHQT-NQRYREQRYVAKNNFDESIPP 1757

Query: 363  YQKIIRNRKKNDFDLLVPE 419
            +++I RNR KN FDLLVPE
Sbjct: 1758 HERITRNRDKNHFDLLVPE 1776


>emb|CBR23797.1| Ycf1 protein [Olea europaea subsp. cuspidata]
          Length = 1876

 Score =  203 bits (517), Expect = 1e-50
 Identities = 101/139 (72%), Positives = 120/139 (86%)
 Frame = +3

Query: 3    LFQLRWDDPLNQRIINNIKVYCLLLRLNNPRKITISSIQRGELCLDIMLIEQNLTFPELM 182
            LFQLRWDD LNQR+INNIKVYC LLRL +PRKI+ISSIQRGE+ LDIMLI++NLT PELM
Sbjct: 1639 LFQLRWDDTLNQRMINNIKVYCFLLRLIDPRKISISSIQRGEMSLDIMLIQKNLTLPELM 1698

Query: 183  KKGLFIIEPTRVSVKNDGQFLMYQTIDISLVHKSKYKTSNQRYHEQGYMDKTHFNESISE 362
            K+G+ IIEP R+SVKNDGQF+MYQTI I LVHKSK++T NQRY EQ Y+ K +F+ESI+ 
Sbjct: 1699 KRGILIIEPIRLSVKNDGQFIMYQTIGILLVHKSKHQT-NQRYREQRYVAKNNFDESITP 1757

Query: 363  YQKIIRNRKKNDFDLLVPE 419
            +++I RNR KN  DLLVPE
Sbjct: 1758 HERITRNRDKNHLDLLVPE 1776


>ref|YP_004563839.1| Ycf1 protein [Olea europaea subsp. cuspidata]
            gi|334085008|emb|CBJ04356.1| Ycf1 protein [Olea europaea
            subsp. cuspidata]
          Length = 1876

 Score =  203 bits (517), Expect = 1e-50
 Identities = 101/139 (72%), Positives = 120/139 (86%)
 Frame = +3

Query: 3    LFQLRWDDPLNQRIINNIKVYCLLLRLNNPRKITISSIQRGELCLDIMLIEQNLTFPELM 182
            LFQLRWDD LNQR+INNIKVYC LLRL +PRKI+ISSIQRGE+ LDIMLI++NLT PELM
Sbjct: 1639 LFQLRWDDTLNQRMINNIKVYCFLLRLIDPRKISISSIQRGEMSLDIMLIQKNLTLPELM 1698

Query: 183  KKGLFIIEPTRVSVKNDGQFLMYQTIDISLVHKSKYKTSNQRYHEQGYMDKTHFNESISE 362
            K+G+ IIEP R+SVKNDGQF+MYQTI I LVHKSK++T NQRY EQ Y+ K +F+ESI+ 
Sbjct: 1699 KRGILIIEPIRLSVKNDGQFIMYQTIGILLVHKSKHQT-NQRYREQRYVAKNNFDESITP 1757

Query: 363  YQKIIRNRKKNDFDLLVPE 419
            +++I RNR KN  DLLVPE
Sbjct: 1758 HERITRNRDKNHLDLLVPE 1776


>emb|CBR23889.1| Ycf1 protein [Olea europaea subsp. cuspidata]
          Length = 1876

 Score =  203 bits (517), Expect = 1e-50
 Identities = 101/139 (72%), Positives = 120/139 (86%)
 Frame = +3

Query: 3    LFQLRWDDPLNQRIINNIKVYCLLLRLNNPRKITISSIQRGELCLDIMLIEQNLTFPELM 182
            LFQLRWDD LNQR+INNIKVYC LLRL +PRKI+ISSIQRGE+ LDIMLI++NLT PELM
Sbjct: 1639 LFQLRWDDTLNQRMINNIKVYCFLLRLIDPRKISISSIQRGEMSLDIMLIQKNLTLPELM 1698

Query: 183  KKGLFIIEPTRVSVKNDGQFLMYQTIDISLVHKSKYKTSNQRYHEQGYMDKTHFNESISE 362
            K+G+ IIEP R+SVKNDGQF+MYQTI I LVHKSK++T NQRY EQ Y+ K +F+ESI+ 
Sbjct: 1699 KRGILIIEPIRLSVKNDGQFIMYQTIGILLVHKSKHQT-NQRYREQRYVAKNNFDESITP 1757

Query: 363  YQKIIRNRKKNDFDLLVPE 419
            +++I RNR KN  DLLVPE
Sbjct: 1758 HERITRNRDKNHLDLLVPE 1776


Top