BLASTX nr result

ID: Lithospermum22_contig00037874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037874
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75646.1| hypothetical protein VITISV_031269 [Vitis vinifera]    81   3e-19
ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [S...    96   3e-19
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              94   5e-19
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              94   5e-19
gb|ABI34321.1| RNase H family protein [Solanum demissum]               82   2e-18

>emb|CAN75646.1| hypothetical protein VITISV_031269 [Vitis vinifera]
          Length = 1701

 Score = 80.9 bits (198), Expect(2) = 3e-19
 Identities = 72/273 (26%), Positives = 117/273 (42%), Gaps = 33/273 (12%)
 Frame = +3

Query: 3    TLLQSVLNTLPMYYLQVMKLPASVINTLEKIFNAFLWDG---------VQWSTWRKACI- 152
            TL++S L+++P+Y + ++++P  V   LEKI   FLW G         V W T    C+ 
Sbjct: 1284 TLIRSTLSSMPIYLMSLLRMPRVVCLRLEKIQRDFLWGGGALERKPHLVNWDT---VCMD 1340

Query: 153  PFEAGLHMKSLHTLNLAFMVKA*YRMR-EGTSIWSKFIIGKYYRLNHPTIVK--MHSAHS 323
              + GL ++ L  LN A + K  +R   E  ++W   I  K+         +    S   
Sbjct: 1341 KRKGGLGVRRLSILNRALLCKWNWRFAIERENLWRHVISRKFGEEEGGWSSRDVRESYGV 1400

Query: 324  RFWKFLIQGRDFCEDQLFWILGEG-NCSFWMDHWLHNGPPTPLPHHNQQPKL----KVKD 488
             FWK + +     + ++ +++G G    FW D W  N     +P  N  P L      K+
Sbjct: 1401 GFWKEIRKEGALMQKKVAFLVGNGRRVKFWKDLWWGN-----VPLCNSFPSLYAFASSKE 1455

Query: 489  VWSNGAWDLDKLRSMVTE-----------EDVQAISHTI----IHEQQADALVWKPTSSG 623
             W    WD   +  + +            E+V+ +  TI    +     D+++WK TS+G
Sbjct: 1456 AWVEEFWDTSGVEGVWSARFSRPFNDWEVEEVERLLLTIRGARLSPLMEDSMMWKVTSNG 1515

Query: 624  MFSFGDTYKALKEQHQSSPIHTAIWNGSIPRKM 722
             FS    Y  L  +      H  IWN S+P K+
Sbjct: 1516 SFSVRSLYNDLSSRRAGLFPHGLIWNPSVPSKV 1548



 Score = 40.8 bits (94), Expect(2) = 3e-19
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
 Frame = +1

Query: 712  PERCCF--WSGDY*GIFSQWMLYSRPRGISVASKC-VCCTQEETIQHVFLSNPVAIKIWE 882
            P + CF  W   +  + +  M   + RG +VA++C +CC +EE+I H+ +    A  +W+
Sbjct: 1545 PSKVCFFAWEASWGKVLT--MDQFKKRGWAVANRCFLCCEEEESIDHILIHCSKARDLWD 1602

Query: 883  FFSLLFGL 906
                LFG+
Sbjct: 1603 LLFALFGV 1610


>ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [Sorghum bicolor]
            gi|241946107|gb|EES19252.1| hypothetical protein
            SORBIDRAFT_09g007400 [Sorghum bicolor]
          Length = 835

 Score = 95.9 bits (237), Expect(2) = 3e-19
 Identities = 73/260 (28%), Positives = 118/260 (45%), Gaps = 20/260 (7%)
 Frame = +3

Query: 3    TLLQSVLNTLPMYYLQVMKLPASVINTLEKIFNAFLWDG------VQWSTWRKAC-IPFE 161
            TL+ S LN  P+Y++ +  LP SVI  L+KI   F W G           W K C    +
Sbjct: 412  TLISSSLNNAPIYHMSIYLLPKSVIGRLDKIRRNFFWQGGSTKQKYHLIKWTKICRSKKK 471

Query: 162  AGLHMKSLHTLNLAFMVKA*YRMREGTSIWSKFIIGKYYRLNHPTIVKMHSAHSRFWKFL 341
             G+ +K +  +N++ ++K  +++     +W K I  KY + N    V    + S  W  L
Sbjct: 472  GGIGIKDIRKMNVSLLIKWWWKLDNEDDVWQKIIKHKYLKSNSILDVSHKQSDSAIWADL 531

Query: 342  IQGRDFCEDQLFWILGEGNCS-FWMDHWLHNGP-----PTPLPHHNQQPKL--KVKDVWS 497
            ++ +D        ++ +G  + FW D WL+  P     P       QQ  L  +VKD   
Sbjct: 532  LKVKDIYLQGRKKVVRDGKTTFFWKDTWLYEKPLCILYPVLFKFCQQQNILVDQVKDNHQ 591

Query: 498  NGAWD---LDKLRS--MVTEEDVQAISHTIIHEQQADALVWKPTSSGMFSFGDTYKALKE 662
            N ++    +D L S       D++ ++ T  H    D++VWK   + +FS    Y A+  
Sbjct: 592  NISFTRCLVDNLLSGWQKILSDMRKVNFTPDH----DSVVWKVAIARLFSVKSVYNAMTS 647

Query: 663  QHQSSPIHTAIWNGSIPRKM 722
              +S P H+ IW   IP K+
Sbjct: 648  D-ESGPSHSKIWKSKIPAKI 666



 Score = 25.8 bits (55), Expect(2) = 3e-19
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 808 CVCCTQEETIQHVFLSNPVAIKIWEFFSLLFG 903
           C  C Q+E++ H+F     A  +W   +   G
Sbjct: 695 CYFCDQDESVSHLFFHCSTAKAVWAIVAHCIG 726


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 94.4 bits (233), Expect(2) = 5e-19
 Identities = 69/255 (27%), Positives = 115/255 (45%), Gaps = 16/255 (6%)
 Frame = +3

Query: 6    LLQSVLNTLPMYYLQVMKLPASVINTLEKIFNAFLWDGVQWST-------WRKACIP-FE 161
            L+Q+ L T+P Y +QVM LP S  N ++K    FLW G   +T       W + C P  E
Sbjct: 796  LVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLW-GHDTNTRKLHSVNWAEICKPRNE 854

Query: 162  AGLHMKSLHTLNLAFMVKA*YRMREG-TSIWSKFIIGKYYRLNHPTIVKMHSAHSRFWKF 338
             GL ++     N AF+ K  +++      +W K +  KY +      ++  S  S  W+ 
Sbjct: 855  GGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRS 914

Query: 339  LIQGRDFCEDQLFWILGEG-NCSFWMDHWLHNGPPTPLPHHNQQP---KLKVKD-VWSNG 503
            +++G+D     + W +G G   +FW D W+ +GP         QP    +KV+D + S  
Sbjct: 915  IMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLASNTDCINQPHMTDIKVEDLITSQR 974

Query: 504  AWDLDKLRSMVTEEDVQAISHT--IIHEQQADALVWKPTSSGMFSFGDTYKALKEQHQSS 677
             WD   L +++    +  +  T   I+ +Q D L W  +++GM +    Y  +       
Sbjct: 975  RWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDGDD 1034

Query: 678  PIHTAIWNGSIPRKM 722
              H  IW  +   K+
Sbjct: 1035 RSHDWIWRATCTEKI 1049



 Score = 26.6 bits (57), Expect(2) = 5e-19
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 784  RGISVASKC-VCCTQEETIQHVFLSNPVAIKIWE 882
            RG++ A+ C VC  ++ET+ H+F    +A   W+
Sbjct: 1070 RGLADAASCPVCGEEDETLDHLFRRCLLAEACWD 1103


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 94.4 bits (233), Expect(2) = 5e-19
 Identities = 69/255 (27%), Positives = 115/255 (45%), Gaps = 16/255 (6%)
 Frame = +3

Query: 6    LLQSVLNTLPMYYLQVMKLPASVINTLEKIFNAFLWDGVQWST-------WRKACIP-FE 161
            L+Q+ L T+P Y +QVM LP S  N ++K    FLW G   +T       W + C P  E
Sbjct: 796  LVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLW-GHDTNTRKLHSVNWAEICKPRNE 854

Query: 162  AGLHMKSLHTLNLAFMVKA*YRMREG-TSIWSKFIIGKYYRLNHPTIVKMHSAHSRFWKF 338
             GL ++     N AF+ K  +++      +W K +  KY +      ++  S  S  W+ 
Sbjct: 855  GGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRS 914

Query: 339  LIQGRDFCEDQLFWILGEG-NCSFWMDHWLHNGPPTPLPHHNQQP---KLKVKD-VWSNG 503
            +++G+D     + W +G G   +FW D W+ +GP         QP    +KV+D + S  
Sbjct: 915  IMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPLASNTDCINQPHMTDIKVEDLITSQR 974

Query: 504  AWDLDKLRSMVTEEDVQAISHT--IIHEQQADALVWKPTSSGMFSFGDTYKALKEQHQSS 677
             WD   L +++    +  +  T   I+ +Q D L W  +++GM +    Y  +       
Sbjct: 975  RWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGHDGDD 1034

Query: 678  PIHTAIWNGSIPRKM 722
              H  IW  +   K+
Sbjct: 1035 RSHDWIWRATCTEKI 1049



 Score = 26.6 bits (57), Expect(2) = 5e-19
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 784  RGISVASKC-VCCTQEETIQHVFLSNPVAIKIWE 882
            RG++ A+ C VC  ++ET+ H+F    +A   W+
Sbjct: 1070 RGLADAASCPVCGEEDETLDHLFRRCLLAEACWD 1103


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 82.4 bits (202), Expect(2) = 2e-18
 Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 2/151 (1%)
 Frame = +3

Query: 276 YRLNHPTIVKMHSAHSRFWKFLIQGRDFCEDQLFWILGEGNCSFWMDHWLHNGP-PTPLP 452
           Y+  HP      S  S  W  +++ R   E+ + WI+  GN S W D+W+ NG     LP
Sbjct: 429 YKRVHPVAKAKSSKQSHTWSKMLKIRHSVENNILWIIYAGNVSMWWDNWMGNGALSNILP 488

Query: 453 HHNQQPKLKVKDVWSNGAWDLDKLRSMVTEEDV-QAISHTIIHEQQADALVWKPTSSGMF 629
             +   K  VKD      WD DKL  ++  + V Q +S  I    Q+D  +W P+ +G F
Sbjct: 489 PPSHYNKDNVKDFIHKREWDFDKLSDILPPQVVNQIVSIPIGDPNQSDYAIWIPSENGHF 548

Query: 630 SFGDTYKALKEQHQSSPIHTAIWNGSIPRKM 722
           +    Y       + + +   IW+G  P KM
Sbjct: 549 TTKSAYVDCSNTREKNDMRNKIWHGKFPFKM 579



 Score = 37.0 bits (84), Expect(2) = 2e-18
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = +1

Query: 793 SVASKCVCCT--QEETIQHVFLSNPVAIKIWEFFSLLFGL 906
           ++ S CVCC   + ETI HVFL++ VA  +W+ F    G+
Sbjct: 603 NIDSNCVCCKNMKTETINHVFLNSDVASYLWKKFGGTLGI 642


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