BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037772
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    60   7e-09
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    62   4e-08
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]      62   6e-08
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    54   1e-07
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...    54   1e-07

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 59.7 bits (143), Expect(2) = 7e-09
 Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
 Frame = +2

Query: 125 LEKELDEAWNEEEVHWQAKAKVQHLKAGDKNTHFFHASTMIRRQQNKLRGFENEVG-QWV 301
           L+KEL + +N EE  WQ K+++  ++ GD+NT +FHA+T  RR QN+++   +E G +W 
Sbjct: 321 LKKELSQEYNNEEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWT 380

Query: 302 EGAD 313
              D
Sbjct: 381 SDED 384



 Score = 25.0 bits (53), Expect(2) = 7e-09
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 12  KWCRENNFNARIRIDDIQAKLRVAYEGDNFDR 107
           KW R +  ++ +RI ++Q KL  A +   FDR
Sbjct: 284 KWKRVSKPSSAVRIQELQFKLDAATKQIPFDR 315


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/63 (41%), Positives = 37/63 (58%)
 Frame = +2

Query: 125 LEKELDEAWNEEEVHWQAKAKVQHLKAGDKNTHFFHASTMIRRQQNKLRGFENEVGQWVE 304
           L+  +DE    EEV+W  +++   +K+GDKNT FFH     R Q+N +R   NE G+W E
Sbjct: 330 LDARMDELEKREEVYWHQRSRQDWIKSGDKNTKFFHQKASHREQRNNVRRIRNEAGEWFE 389

Query: 305 GAD 313
             D
Sbjct: 390 DED 392


>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
          Length = 381

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/61 (45%), Positives = 41/61 (67%)
 Frame = +2

Query: 125 LEKELDEAWNEEEVHWQAKAKVQHLKAGDKNTHFFHASTMIRRQQNKLRGFENEVGQWVE 304
           L KEL +A+ +EE  W+ K+++Q L  GD+N  FFHAST  RR +NK+   +N +G+ V 
Sbjct: 123 LRKELLQAYKDEEAFWRNKSRIQWLTYGDRNIRFFHASTKNRRAKNKILSIQNNLGEEVF 182

Query: 305 G 307
           G
Sbjct: 183 G 183


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
           42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 54.3 bits (129), Expect(2) = 1e-07
 Identities = 25/61 (40%), Positives = 38/61 (62%)
 Frame = +2

Query: 125 LEKELDEAWNEEEVHWQAKAKVQHLKAGDKNTHFFHASTMIRRQQNKLRGFENEVGQWVE 304
           +++EL  A+ +EE +WQ K++ Q +K GD+NT FFHA T  R   N+L   ++E G    
Sbjct: 703 IQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTIKDEEGMIYR 762

Query: 305 G 307
           G
Sbjct: 763 G 763



 Score = 26.2 bits (56), Expect(2) = 1e-07
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 3   ALVKWCRENNFNARIRIDDIQAKLRVAYEGDN 98
           A+ K   ++N N+RIRI+ +QA L  A    N
Sbjct: 662 AMAKLKHKSNLNSRIRINQLQAALDKAMSSVN 693


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
           putative protein [Arabidopsis thaliana]
          Length = 1294

 Score = 54.3 bits (129), Expect(2) = 1e-07
 Identities = 25/61 (40%), Positives = 38/61 (62%)
 Frame = +2

Query: 125 LEKELDEAWNEEEVHWQAKAKVQHLKAGDKNTHFFHASTMIRRQQNKLRGFENEVGQWVE 304
           +++EL  A+ +EE +WQ K++ Q +K GD+NT FFHA T  R   N+L   ++E G    
Sbjct: 683 IQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVNRLVTIKDEEGMIYR 742

Query: 305 G 307
           G
Sbjct: 743 G 743



 Score = 26.2 bits (56), Expect(2) = 1e-07
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 3   ALVKWCRENNFNARIRIDDIQAKLRVAYEGDN 98
           A+ K   ++N N+RIRI+ +QA L  A    N
Sbjct: 642 AMAKLKHKSNLNSRIRINQLQAALDKAMSSVN 673