BLASTX nr result

ID: Lithospermum22_contig00037756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037756
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234362.1| GAMYB-like2 [Solanum lycopersicum] gi|121281...    67   2e-09
ref|NP_001234357.1| GAMyb-like1 [Solanum lycopersicum] gi|121281...    59   4e-07

>ref|NP_001234362.1| GAMYB-like2 [Solanum lycopersicum] gi|121281634|gb|ABM53274.1|
           GAMYB-like2 [Solanum lycopersicum]
          Length = 504

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
 Frame = -3

Query: 329 AIHDMPADSLLDIPPSIMIDQIPNSSYGSKSLFSSMNPAKRLRASGLLLP----RSSFSS 162
           A+ D+P   +LDIP   ++ Q  NS+Y S+S  S+  PAKR+R S  L        S S 
Sbjct: 204 ALLDIPTGGILDIPGRSLLAQGLNSAYYSRSFLSTTPPAKRIRGSESLFSGLNGDCSPSK 263

Query: 161 ND-AVPIYSQYPGDGSEIGQSFSVSSAYDHNLPPD-HIASSQLLSGSHAFINGN 6
           ND +     Q+  DGS + QS   SS+++ NL  D H +S  ++ GSHA +NG+
Sbjct: 264 NDVSFSTCHQHQDDGSLLAQSMGFSSSFNQNLTSDYHPSSLGVIPGSHALLNGH 317


>ref|NP_001234357.1| GAMyb-like1 [Solanum lycopersicum] gi|121281632|gb|ABM53273.1|
           GAMyb-like1 [Solanum lycopersicum]
          Length = 537

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
 Frame = -3

Query: 320 DMPADSLLDIPPSIMIDQIPNSSYGSKSLFSSMNPAKRLRASGLLLPRSSFSSNDAVPIY 141
           D+PA SLL+ P S  + Q   + Y S    S+  PAKR+R S      S FS ++   + 
Sbjct: 204 DIPARSLLNDPVSNFLSQGHRAPYSSTYFLSTTYPAKRIRGS-----ESVFSGSNGDLLN 258

Query: 140 S-QYPGDGSEIGQSFSVS---SAYDHNLP-PDHIASSQLLSGSHAFINGN 6
           S QY  DGS + Q+ +     S+Y+HNL   D  A S ++ G HA++NGN
Sbjct: 259 SLQYQNDGSLLAQAQAQPLDFSSYNHNLTYDDQRAISNIVPGGHAYLNGN 308


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