BLASTX nr result

ID: Lithospermum22_contig00037742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037742
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322279.1| chromatin remodeling complex subunit [Populu...   150   8e-35
ref|XP_004168975.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik...   146   2e-33
ref|XP_004138253.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik...   146   2e-33
ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vi...   145   4e-33
emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]   145   4e-33

>ref|XP_002322279.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222869275|gb|EEF06406.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 570

 Score =  150 bits (380), Expect = 8e-35
 Identities = 72/102 (70%), Positives = 82/102 (80%)
 Frame = -3

Query: 369 PELDLYTIPSYSNWFQWNTIHEIERLSLREFFDGTSVTRTPRIYKEYRDFIITKYRELPP 190
           PELDLYTIPSYS+WF W+ IHE ER++LREFFDG+S+TRTP+IYKEYRDFII KYRE P 
Sbjct: 19  PELDLYTIPSYSSWFSWHDIHETERVALREFFDGSSITRTPKIYKEYRDFIINKYREDP- 77

Query: 189 PIDPYSKKRVLNFTDVRKSLVGDVSVLQKVFTFLEKWGLINF 64
                   R L FT++RKSLVGDVS+L KVF FL  WGLINF
Sbjct: 78  -------SRRLTFTEIRKSLVGDVSLLNKVFLFLNNWGLINF 112


>ref|XP_004168975.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Cucumis sativus]
          Length = 566

 Score =  146 bits (369), Expect = 2e-33
 Identities = 69/107 (64%), Positives = 88/107 (82%)
 Frame = -3

Query: 384 QSAEAPELDLYTIPSYSNWFQWNTIHEIERLSLREFFDGTSVTRTPRIYKEYRDFIITKY 205
           ++ + P+LDLYTIPS+S+WF W+ IHE E+L+L+EFFDG+S++RTPRIYKEYRDFII KY
Sbjct: 12  RAPDEPDLDLYTIPSHSSWFSWDDIHETEKLALKEFFDGSSISRTPRIYKEYRDFIINKY 71

Query: 204 RELPPPIDPYSKKRVLNFTDVRKSLVGDVSVLQKVFTFLEKWGLINF 64
           RE     +P S+   L FT++RKSLVGDV++L KVF FLE WGLINF
Sbjct: 72  RE-----EPSSR---LTFTEIRKSLVGDVNLLHKVFAFLETWGLINF 110


>ref|XP_004138253.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Cucumis sativus]
          Length = 566

 Score =  146 bits (369), Expect = 2e-33
 Identities = 69/107 (64%), Positives = 88/107 (82%)
 Frame = -3

Query: 384 QSAEAPELDLYTIPSYSNWFQWNTIHEIERLSLREFFDGTSVTRTPRIYKEYRDFIITKY 205
           ++ + P+LDLYTIPS+S+WF W+ IHE E+L+L+EFFDG+S++RTPRIYKEYRDFII KY
Sbjct: 12  RAPDEPDLDLYTIPSHSSWFSWDDIHETEKLALKEFFDGSSISRTPRIYKEYRDFIINKY 71

Query: 204 RELPPPIDPYSKKRVLNFTDVRKSLVGDVSVLQKVFTFLEKWGLINF 64
           RE     +P S+   L FT++RKSLVGDV++L KVF FLE WGLINF
Sbjct: 72  RE-----EPSSR---LTFTEIRKSLVGDVNLLHKVFAFLETWGLINF 110


>ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vitis vinifera]
           gi|297734457|emb|CBI15704.3| unnamed protein product
           [Vitis vinifera]
          Length = 563

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/104 (65%), Positives = 84/104 (80%)
 Frame = -3

Query: 375 EAPELDLYTIPSYSNWFQWNTIHEIERLSLREFFDGTSVTRTPRIYKEYRDFIITKYREL 196
           + PELDLYTIP +S+WF W+ IHE E++SL+EFFDG+S++RTP+IYKEYRDFII+KYRE 
Sbjct: 15  DEPELDLYTIPIHSSWFSWDEIHEKEKISLKEFFDGSSISRTPKIYKEYRDFIISKYRED 74

Query: 195 PPPIDPYSKKRVLNFTDVRKSLVGDVSVLQKVFTFLEKWGLINF 64
           P         R L F ++RKSLVGDVS+L KVF FLE+WGLINF
Sbjct: 75  P--------SRRLTFAEIRKSLVGDVSLLHKVFLFLERWGLINF 110


>emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]
          Length = 563

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/104 (65%), Positives = 84/104 (80%)
 Frame = -3

Query: 375 EAPELDLYTIPSYSNWFQWNTIHEIERLSLREFFDGTSVTRTPRIYKEYRDFIITKYREL 196
           + PELDLYTIP +S+WF W+ IHE E++SL+EFFDG+S++RTP+IYKEYRDFII+KYRE 
Sbjct: 15  DEPELDLYTIPIHSSWFSWDEIHEKEKISLKEFFDGSSISRTPKIYKEYRDFIISKYRED 74

Query: 195 PPPIDPYSKKRVLNFTDVRKSLVGDVSVLQKVFTFLEKWGLINF 64
           P         R L F ++RKSLVGDVS+L KVF FLE+WGLINF
Sbjct: 75  P--------SRRLTFAEIRKSLVGDVSLLHKVFLFLERWGLINF 110


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