BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037684
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   115   4e-24
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja...   114   1e-23
gb|ABB46931.2| retrotransposon protein, putative, unclassified [...   114   1e-23
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             113   1e-23
gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indi...   113   2e-23

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/141 (42%), Positives = 88/141 (62%), Gaps = 3/141 (2%)
 Frame = -2

Query: 416 SDIMHAVDSFFSSSRLLNSINHTHACLIPKTLSPSNMTELRSISLCNIVAKIIGKIMTNR 237
           SD++  V+SF         +N T+ CLIPKT  P+ MTELR ISLCN+  K+I KI+  R
Sbjct: 249 SDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELRPISLCNVGYKVISKILCQR 308

Query: 236 LRPILMSIISDKLSYRAE*SLITF**LM---KCYFMNHSKSVKNDNMAIKLDMNNAYDSV 66
           L+ +L ++IS+  S   +  LI+   L+     + +  + S K+  MAIK DM+ AYD V
Sbjct: 309 LKTVLPNLISETQSAFVDGRLISDNILIAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQV 368

Query: 65  EWRFLEAVMLKLGFCRQWVDW 3
           EW F+EA++ K+GFC +W+ W
Sbjct: 369 EWNFIEALLRKMGFCEKWISW 389


>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1888

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/140 (43%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
 Frame = -2

Query: 413  DIMHAVDSFFSSSRLLNSINHTHACLIPKTLSPSNMTELRSISLCNIVAKIIGKIMTNRL 234
            DI+ AV  FFS   + + +N T   LIPKT  P  + + R ISLCN+V KI+ K + NRL
Sbjct: 1037 DIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRL 1096

Query: 233  RPILMSIISDKLSYRAE*SLITF**LMKCYFMNH---SKSVKNDNMAIKLDMNNAYDSVE 63
            RPIL  ++S   S      LIT   L+   + +H   +K+ +N   A KLD++ AYD V+
Sbjct: 1097 RPILDDLVSQNQSAFVPGRLITDNALIAFEYFHHIQRNKNPENAYSAYKLDLSKAYDRVD 1156

Query: 62   WRFLEAVMLKLGFCRQWVDW 3
            W FLE  M+KLGF   WV W
Sbjct: 1157 WEFLEQAMVKLGFAHCWVKW 1176


>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1853

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/140 (43%), Positives = 82/140 (58%), Gaps = 3/140 (2%)
 Frame = -2

Query: 413  DIMHAVDSFFSSSRLLNSINHTHACLIPKTLSPSNMTELRSISLCNIVAKIIGKIMTNRL 234
            DI+ AV  FFS   + + +N T   LIPKT  P  + + R ISLCN+V KI+ K + NRL
Sbjct: 1002 DIVRAVQEFFSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRL 1061

Query: 233  RPILMSIISDKLSYRAE*SLITF**LMKCYFMNH---SKSVKNDNMAIKLDMNNAYDSVE 63
            RPIL  ++S   S      LIT   L+   + +H   +K+ +N   A KLD++ AYD V+
Sbjct: 1062 RPILDDLVSQNQSAFVPGRLITDNALIAFEYFHHIQRNKNPENAYSAYKLDLSKAYDRVD 1121

Query: 62   WRFLEAVMLKLGFCRQWVDW 3
            W FLE  M+KLGF   WV W
Sbjct: 1122 WEFLEQAMVKLGFAHCWVKW 1141


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  113 bits (283), Expect = 1e-23
 Identities = 62/140 (44%), Positives = 85/140 (60%), Gaps = 3/140 (2%)
 Frame = -2

Query: 413 DIMHAVDSFFSSSRLLNSINHTHACLIPKTLSPSNMTELRSISLCNIVAKIIGKIMTNRL 234
           D++  V+SF         +N T+ CLIPKT  P+ MTELR ISLCN+  KII KI+  RL
Sbjct: 316 DMLFLVNSFLQDGVFDKQLNTTNICLIPKTERPTRMTELRPISLCNVGYKIISKILCQRL 375

Query: 233 RPILMSIISDKLSYRAE*SLITF**LM---KCYFMNHSKSVKNDNMAIKLDMNNAYDSVE 63
           + IL S+IS+  S   E  LI+   L+     + +  + S K   MAIK DM+ AYD VE
Sbjct: 376 KKILPSLISETHSAFVEGRLISDNILIAQEMFHGLRTNPSCKGKFMAIKTDMSKAYDRVE 435

Query: 62  WRFLEAVMLKLGFCRQWVDW 3
           W F+E ++ K+GFC +W+ W
Sbjct: 436 WNFIEELLKKMGFCEKWISW 455


>gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indica Group]
          Length = 1300

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/140 (41%), Positives = 84/140 (60%), Gaps = 3/140 (2%)
 Frame = -2

Query: 413 DIMHAVDSFFSSSRLLNSINHTHACLIPKTLSPSNMTELRSISLCNIVAKIIGKIMTNRL 234
           DI+ AV  FF +  + + +N T   LIPK   PS + + R ISLCN++ K++ K + NR+
Sbjct: 388 DILRAVKEFFHTGVMPDDVNETTIVLIPKVAQPSQLKDFRPISLCNVLYKVVSKCLVNRM 447

Query: 233 RPILMSIISDKLSYRAE*SLITF**LM--KCY-FMNHSKSVKNDNMAIKLDMNNAYDSVE 63
           RPIL  ++S   S      LIT   L+  +C+ F+  ++S  N   A KLD++ AYD V+
Sbjct: 448 RPILDEVVSPNQSAFVPGRLITDNALLAFECFHFIQKNRSPNNAACAYKLDLSKAYDRVD 507

Query: 62  WRFLEAVMLKLGFCRQWVDW 3
           WRFLE  M K+GF  +WV W
Sbjct: 508 WRFLEQAMYKMGFAHRWVSW 527