BLASTX nr result

ID: Lithospermum22_contig00037668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037668
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas...    93   2e-17
emb|CAN69691.1| hypothetical protein VITISV_026777 [Vitis vinifera]    91   7e-17
emb|CAN69815.1| hypothetical protein VITISV_010421 [Vitis vinifera]    91   1e-16
emb|CAN66306.1| hypothetical protein VITISV_031415 [Vitis vinifera]    89   3e-16
gb|AFN88207.1| integrase core domain containing protein [Phaseol...    89   4e-16

>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
           x hybrida]
          Length = 389

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 54/124 (43%), Positives = 76/124 (61%)
 Frame = -1

Query: 413 GSDTTQILHPKQVLDVKLSIKDVGQLHFFLGFEIGHVDGVVTMSQCKFANELIEESGILQ 234
           G++ T+I   K  LD +  IKD+G++ +FLG EI H    + ++Q KFA +L+ E     
Sbjct: 77  GNNHTEISALKSFLDSEFRIKDLGEVSYFLGMEILHEPDGLIVTQRKFAMDLLSE----Y 132

Query: 233 QSVSSKLPVIPLPLNTKLFPDEGALLDAPEYYRGILGKLNFLTNKRHVLSFAVQTLSQFM 54
            S+S +    PL  + KL    G LL  P +YR ++GKLN+LT+ R  +SFAVQTLSQ M
Sbjct: 133 SSLSPRTVTTPLDPSLKLSSISGELLQDPTFYRRLVGKLNYLTHTRPDISFAVQTLSQHM 192

Query: 53  QHPR 42
           Q PR
Sbjct: 193 QSPR 196


>emb|CAN69691.1| hypothetical protein VITISV_026777 [Vitis vinifera]
          Length = 1223

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 54/126 (42%), Positives = 72/126 (57%)
 Frame = -1

Query: 413  GSDTTQILHPKQVLDVKLSIKDVGQLHFFLGFEIGHVDGVVTMSQCKFANELIEESGILQ 234
            GSD   I   KQ L      KD+G+L +FLG EI      V +SQ K+A +++EE+G+L 
Sbjct: 930  GSDQDGIQKLKQYLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLD 989

Query: 233  QSVSSKLPVIPLPLNTKLFPDEGALLDAPEYYRGILGKLNFLTNKRHVLSFAVQTLSQFM 54
                 K    P+  N KL P +G  L  PE YR ++GKLN+LT  R  +SF V  +SQF+
Sbjct: 990  ----CKPVDTPMDPNVKLVPGQGEPLGDPERYRRLVGKLNYLTITRPDISFPVSVVSQFL 1045

Query: 53   QHPRDS 36
            Q P DS
Sbjct: 1046 QSPCDS 1051


>emb|CAN69815.1| hypothetical protein VITISV_010421 [Vitis vinifera]
          Length = 584

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 50/124 (40%), Positives = 74/124 (59%)
 Frame = -1

Query: 413 GSDTTQILHPKQVLDVKLSIKDVGQLHFFLGFEIGHVDGVVTMSQCKFANELIEESGILQ 234
           G+D   I   K+ L  K  IKD+ QL +FLG E+ H    +++SQ K+  ++++E+G+L 
Sbjct: 275 GNDENVISALKESLHTKFRIKDLDQLRYFLGIEVAHSTDGISISQRKYTLDILDEAGLL- 333

Query: 233 QSVSSKLPVIPLPLNTKLFPDEGALLDAPEYYRGILGKLNFLTNKRHVLSFAVQTLSQFM 54
               +KL   P+  N KL P  G LL  P  YR ++G+L +LT  R  +S++V  LSQFM
Sbjct: 334 ---GAKLLSTPMEENNKLLPXVGDLLKNPSTYRRLVGQLIYLTITRLEISYSVHILSQFM 390

Query: 53  QHPR 42
           Q PR
Sbjct: 391 QEPR 394


>emb|CAN66306.1| hypothetical protein VITISV_031415 [Vitis vinifera]
          Length = 250

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 53/126 (42%), Positives = 72/126 (57%)
 Frame = -1

Query: 413 GSDTTQILHPKQVLDVKLSIKDVGQLHFFLGFEIGHVDGVVTMSQCKFANELIEESGILQ 234
           GSD   I   KQ L      KD+G+L +FLG EI      V +SQ K+A +++EE+G+L 
Sbjct: 34  GSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLD 93

Query: 233 QSVSSKLPVIPLPLNTKLFPDEGALLDAPEYYRGILGKLNFLTNKRHVLSFAVQTLSQFM 54
                K    P+  N KL P +G LL  P  YR ++GKLN+LT  R  +SF V  +SQF+
Sbjct: 94  ----CKPVDTPMDPNVKLVPGQGELLGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFL 149

Query: 53  QHPRDS 36
           Q P D+
Sbjct: 150 QSPCDN 155


>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
          Length = 1387

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 50/123 (40%), Positives = 73/123 (59%)
 Frame = -1

Query: 413  GSDTTQILHPKQVLDVKLSIKDVGQLHFFLGFEIGHVDGVVTMSQCKFANELIEESGILQ 234
            GSD   I   KQ L      KD+G+L +FLG E+   +  + +SQ K+A +++EE G++ 
Sbjct: 1078 GSDHHGISQVKQHLCQNFQTKDLGKLRYFLGIEVAQSNTGIVISQRKYALDILEEIGLM- 1136

Query: 233  QSVSSKLPVIPLPLNTKLFPDEGALLDAPEYYRGILGKLNFLTNKRHVLSFAVQTLSQFM 54
               +SK    P+  N KL P++G  L  PE YR ++GKLN+LT  R  +SFAV  +SQF+
Sbjct: 1137 ---NSKSVDTPMDPNVKLLPNQGEPLSDPEKYRRLVGKLNYLTVTRPDISFAVSVVSQFL 1193

Query: 53   QHP 45
              P
Sbjct: 1194 NSP 1196