BLASTX nr result

ID: Lithospermum22_contig00037618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037618
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30568.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002523428.1| centromere/microtubule binding protein cbf5,...   124   1e-26
ref|XP_002540014.1| centromere/microtubule binding protein cbf5,...   124   1e-26
ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex s...   124   1e-26
ref|XP_003531534.1| PREDICTED: H/ACA ribonucleoprotein complex s...   123   1e-26

>emb|CBI30568.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  124 bits (310), Expect = 1e-26
 Identities = 53/63 (84%), Positives = 60/63 (95%)
 Frame = +3

Query: 105 IKPQSFTPSIDTSQWPILLKNYANLNIRTGHYTPLPSGFSPLKRPITEYIKYGVMNLDKP 284
           IKPQSFTPS+DTSQWPILLKNY  LN+RTGHYTPLPSG+SPLKRP+ EYI+YG++NLDKP
Sbjct: 41  IKPQSFTPSLDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGILNLDKP 100

Query: 285 ANP 293
           ANP
Sbjct: 101 ANP 103


>ref|XP_002523428.1| centromere/microtubule binding protein cbf5, putative [Ricinus
           communis] gi|223537378|gb|EEF39007.1|
           centromere/microtubule binding protein cbf5, putative
           [Ricinus communis]
          Length = 432

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/71 (78%), Positives = 61/71 (85%)
 Frame = +3

Query: 81  DQETTVDFIKPQSFTPSIDTSQWPILLKNYANLNIRTGHYTPLPSGFSPLKRPITEYIKY 260
           DQE  +  IKPQSFTP  DTS+WPILLKNY  LN+RTGHYTPLPSG SPLKRP+ EYI+Y
Sbjct: 10  DQEQDLTMIKPQSFTPPNDTSKWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYIRY 69

Query: 261 GVMNLDKPANP 293
           GVMNLDKPANP
Sbjct: 70  GVMNLDKPANP 80


>ref|XP_002540014.1| centromere/microtubule binding protein cbf5, putative [Ricinus
           communis] gi|223500118|gb|EEF22369.1|
           centromere/microtubule binding protein cbf5, putative
           [Ricinus communis]
          Length = 264

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/71 (78%), Positives = 61/71 (85%)
 Frame = +3

Query: 81  DQETTVDFIKPQSFTPSIDTSQWPILLKNYANLNIRTGHYTPLPSGFSPLKRPITEYIKY 260
           DQE  +  IKPQSFTP  DTS+WPILLKNY  LN+RTGHYTPLPSG SPLKRP+ EYI+Y
Sbjct: 10  DQEQDLTMIKPQSFTPPNDTSKWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYIRY 69

Query: 261 GVMNLDKPANP 293
           GVMNLDKPANP
Sbjct: 70  GVMNLDKPANP 80


>ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis
           vinifera]
          Length = 586

 Score =  124 bits (310), Expect = 1e-26
 Identities = 53/63 (84%), Positives = 60/63 (95%)
 Frame = +3

Query: 105 IKPQSFTPSIDTSQWPILLKNYANLNIRTGHYTPLPSGFSPLKRPITEYIKYGVMNLDKP 284
           IKPQSFTPS+DTSQWPILLKNY  LN+RTGHYTPLPSG+SPLKRP+ EYI+YG++NLDKP
Sbjct: 41  IKPQSFTPSLDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGILNLDKP 100

Query: 285 ANP 293
           ANP
Sbjct: 101 ANP 103


>ref|XP_003531534.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
           max]
          Length = 555

 Score =  123 bits (309), Expect = 1e-26
 Identities = 53/63 (84%), Positives = 60/63 (95%)
 Frame = +3

Query: 105 IKPQSFTPSIDTSQWPILLKNYANLNIRTGHYTPLPSGFSPLKRPITEYIKYGVMNLDKP 284
           IKPQSFTP IDTSQWPILLKNY  LN+RTGHYTP+PSG+SPLKRP++EY+KYGV+NLDKP
Sbjct: 2   IKPQSFTPPIDTSQWPILLKNYERLNVRTGHYTPIPSGYSPLKRPLSEYLKYGVLNLDKP 61

Query: 285 ANP 293
           ANP
Sbjct: 62  ANP 64


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