BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037485
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   117   3e-25
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     112   4e-24
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   112   4e-24
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   111   9e-24
gb|AAD17357.1| contains similarity to retrovirus-related polypro...   112   4e-23

>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  117 bits (293), Expect(2) = 3e-25
 Identities = 51/91 (56%), Positives = 72/91 (79%)
 Frame = +3

Query: 96   KFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVC 275
            KF+TELGVVPS  G ++L CDN  AI+QAKEP +  KSK++  +YHLIR++++RG++K+ 
Sbjct: 870  KFITELGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLIREIIDRGDVKIS 929

Query: 276  KVATEANIDDPFTKPLSQAKHDEHATNIGLR 368
            +V+T+AN+ D FTKPL Q KH+ H T IG+R
Sbjct: 930  RVSTDANVADHFTKPLPQPKHESHTTAIGIR 960



 Score = 22.7 bits (47), Expect(2) = 3e-25
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 52  YIATLDAAKEACWI 93
           YIA  +AAKE  WI
Sbjct: 855 YIAASEAAKEVVWI 868


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  112 bits (279), Expect(2) = 4e-24
 Identities = 51/100 (51%), Positives = 74/100 (74%)
 Frame = +3

Query: 75   KRSLLDMKFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLN 254
            K ++   KFV+ELGV+ ST G + L CDN+ AI+QAKEP +  KSK++  +YHLIR++++
Sbjct: 1216 KEAVWIKKFVSELGVMTSTTGPMSLYCDNSGAIAQAKEPRSHQKSKHILRRYHLIREIVD 1275

Query: 255  RGNIKVCKVATEANIDDPFTKPLSQAKHDEHATNIGLRQM 374
            RG++K+CKV T+ NI DP TKPL Q KH+ H   +G+R +
Sbjct: 1276 RGDVKICKVHTDLNIADPLTKPLPQPKHEAHTRAMGIRYL 1315



 Score = 24.3 bits (51), Expect(2) = 4e-24
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 52   YIATLDAAKEACWI 93
            YIA  +AAKEA WI
Sbjct: 1208 YIAASEAAKEAVWI 1221


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  112 bits (281), Expect(2) = 4e-24
 Identities = 49/92 (53%), Positives = 70/92 (76%)
 Frame = +3

Query: 99   FVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVCK 278
            F+TELG+VPS    ++L CDN  AI+QAKEP +  KSK++  +YHLIR++++RG++K+CK
Sbjct: 804  FITELGMVPSASSPMDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICK 863

Query: 279  VATEANIDDPFTKPLSQAKHDEHATNIGLRQM 374
            V T+ NI DP TKPL+Q KH+ H   IG+R +
Sbjct: 864  VHTDLNIADPLTKPLTQPKHEAHTRAIGIRYL 895



 Score = 23.5 bits (49), Expect(2) = 4e-24
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 52  YIATLDAAKEACWI*N 99
           YIA  +AAKE  WI N
Sbjct: 788 YIAASEAAKEGVWIRN 803


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  111 bits (278), Expect(2) = 9e-24
 Identities = 47/93 (50%), Positives = 70/93 (75%)
 Frame = +3

Query: 99   FVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLNRGNIKVCK 278
            F+ ELGVVPS    ++L CDN  AI+QAKEP +  KSK++  +YHLIR++++RG++K+CK
Sbjct: 1220 FIAELGVVPSASSPMDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLIRELVDRGDVKICK 1279

Query: 279  VATEANIDDPFTKPLSQAKHDEHATNIGLRQMS 377
            + T+ N+ DP TKPL+Q KH+ H   IG+R ++
Sbjct: 1280 IHTDLNVADPLTKPLTQPKHEAHTRAIGIRYLN 1312



 Score = 23.5 bits (49), Expect(2) = 9e-24
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 52   YIATLDAAKEACWI*N 99
            YIA  +AAKE  WI N
Sbjct: 1204 YIAASEAAKEGVWIRN 1219


>gb|AAD17357.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
           thaliana] gi|7267382|emb|CAB77943.1| putative transposon
           protein [Arabidopsis thaliana]
          Length = 769

 Score =  112 bits (279), Expect = 4e-23
 Identities = 49/98 (50%), Positives = 73/98 (74%)
 Frame = +3

Query: 75  KRSLLDMKFVTELGVVPSTEGSVELLCDNTSAISQAKEP*ADHKSKNVPSKYHLIRDMLN 254
           K ++   KF+TEL VVP+  G ++L CDN  AI+Q KE  +  KSK++  +YHLIR++++
Sbjct: 668 KEAVWIRKFITELSVVPNIPGLIDLYCDNNGAIAQTKERRSHQKSKHIQRRYHLIREIID 727

Query: 255 RGNIKVCKVATEANIDDPFTKPLSQAKHDEHATNIGLR 368
           RG++K+ +V+T+AN+ DPFTKPL Q KH+ H T IG+R
Sbjct: 728 RGDVKISRVSTDANVTDPFTKPLPQPKHESHTTVIGIR 765