BLASTX nr result

ID: Lithospermum22_contig00037465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037465
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    80   2e-13
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   75   4e-12
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    72   4e-11
emb|CAN73960.1| hypothetical protein VITISV_023007 [Vitis vinifera]    72   4e-11
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    71   8e-11

>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/109 (39%), Positives = 64/109 (58%)
 Frame = -3

Query: 329 QCIDNSWFSIMLNGELHSYFPSTKGVRQGDPLSPALFILAEEYLLRGLQKLTEENPEIKY 150
           QCI ++ FSI ++G L  YF  +KG+RQGDPLSP+LF++A E L R L+    +     +
Sbjct: 624 QCITSTSFSINVSGSLCGYFKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYH 683

Query: 149 QTGCSVTVPCLALADDCIFFCNGSLSSVKKLMGWLHHCQQVSGQVINTE 3
                V +  LA ADD + F +G  SS++ +   L   + +SG  +NTE
Sbjct: 684 PKASEVRISSLAFADDLMIFYDGKASSLRGIKSVLESFKNLSGLEMNTE 732


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/108 (37%), Positives = 60/108 (55%)
 Frame = -3

Query: 326 CIDNSWFSIMLNGELHSYFPSTKGVRQGDPLSPALFILAEEYLLRGLQKLTEENPEIKYQ 147
           C++   FS+ +NGEL  YF   +G+RQGDPLSP LFI++ E L R L +   E+    + 
Sbjct: 79  CMETPKFSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSRMLDRCAAESRLSLHP 138

Query: 146 TGCSVTVPCLALADDCIFFCNGSLSSVKKLMGWLHHCQQVSGQVINTE 3
              S  +  LA ADD + F +G   S+ ++   L    + SG  +NTE
Sbjct: 139 KCHSPVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYLNTE 186


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
 Frame = -3

Query: 326 CIDNSWFSIMLNGELHSYFPSTKGVRQGDPLSPALFILAEEYLLRGLQKLTEEN--PEIK 153
           C+ +  +S+++NG+ + +   T+G+RQGDPLSPALF+L  E L+  L K  +      I+
Sbjct: 608 CVTSVSYSVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAGKITGIQ 667

Query: 152 YQTGCSVTVPCLALADDCIFFCNGSLSSVKKLMGWLHHCQQVSGQVIN 9
           +Q    V+V  L  ADD +  C  +    ++LM  L    Q+SGQ+IN
Sbjct: 668 FQDK-KVSVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMIN 714


>emb|CAN73960.1| hypothetical protein VITISV_023007 [Vitis vinifera]
          Length = 854

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
 Frame = -3

Query: 326 CIDNSWFSIMLNGELHSYFPSTKGVRQGDPLSPALFILAEEYLLRGLQKLTE----ENPE 159
           CI  + FSI++NG L  YFP+++G+RQGDPLSP LF+L  E L   L+++ +        
Sbjct: 370 CISTASFSILVNGVLAGYFPNSRGLRQGDPLSPYLFVLGMEVLSAMLRRVVDGGFISGCN 429

Query: 158 IKYQTGCSVTVPCLALADDCIFFCNGSLSSVKKLMGWLHHCQQVSGQVIN 9
           I+ + G  + V  L  ADD I FC      +  L   L   +  SG  IN
Sbjct: 430 IQGRGGMEINVSYLLFADDTIIFCEARQDHITYLSWILVWFEAASGLRIN 479


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
 Frame = -3

Query: 323 IDNSWFSIMLNGELHSYFPSTKGVRQGDPLSPALFILAEEYLLRGLQKLTEENPEIKYQT 144
           + ++  S+++NG+   +F  + GVRQGDPLSP LF L EE L R L     +   I    
Sbjct: 622 LQSARLSVLVNGKAVGFFTCSHGVRQGDPLSPLLFCLVEEVLSRALSMAATDGQLIPMSY 681

Query: 143 GCSVTVPC-LALADDCIFFCNGSLSSVKKLMGWLHHCQQVSGQVIN 9
              V+ P  +  ADD + FC G+  ++++L+       +VSGQ+IN
Sbjct: 682 CRGVSFPTHILYADDVLIFCTGTKRNIRRLIKIFSQYSEVSGQLIN 727


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