BLASTX nr result

ID: Lithospermum22_contig00037405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037405
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26
ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...   116   2e-24
ref|XP_002328265.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_003608278.1| Pentatricopeptide repeat-containing protein ...   110   2e-22
ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containi...   109   2e-22

>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
           protein product [Vitis vinifera]
          Length = 878

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/90 (64%), Positives = 70/90 (77%)
 Frame = -2

Query: 277 KGIMPNLQSFKLLIKAFCRIGEFTPAQEVFDISLSIFGHKEALYSLMFNELLARGEAMEA 98
           KGI PN+ SF+LLIKAFC+  +F   +EVF+I+LSI GHKEALYSLMFNELL  GE  EA
Sbjct: 662 KGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIGGEVSEA 721

Query: 97  KKIFEAALDRCLYLGGFLYKDLFHNLCREE 8
           K++F+AALDRC  LG F Y DL   LC++E
Sbjct: 722 KELFDAALDRCFDLGNFQYNDLIEKLCKDE 751


>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/90 (58%), Positives = 70/90 (77%)
 Frame = -2

Query: 277 KGIMPNLQSFKLLIKAFCRIGEFTPAQEVFDISLSIFGHKEALYSLMFNELLARGEAMEA 98
           KGI PN+ SF++LIKAFC+  +F  + EVF+I+L++ GHKEALY+LMFNELL  G+  EA
Sbjct: 658 KGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEA 717

Query: 97  KKIFEAALDRCLYLGGFLYKDLFHNLCREE 8
           K++FE ALDR   +G FLYKDL   LC++E
Sbjct: 718 KELFETALDRSFDIGNFLYKDLIDRLCKDE 747


>ref|XP_002328265.1| predicted protein [Populus trichocarpa] gi|222837780|gb|EEE76145.1|
           predicted protein [Populus trichocarpa]
          Length = 742

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/90 (57%), Positives = 70/90 (77%)
 Frame = -2

Query: 277 KGIMPNLQSFKLLIKAFCRIGEFTPAQEVFDISLSIFGHKEALYSLMFNELLARGEAMEA 98
           KGI PN+ SF +LIKAFC+  +F+   E+F+I+L++ GHKEALYSL FNELL  GE ++A
Sbjct: 567 KGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKA 626

Query: 97  KKIFEAALDRCLYLGGFLYKDLFHNLCREE 8
           K++FE ALDR   +G FLYKDL  +LC++E
Sbjct: 627 KELFETALDRSFDVGNFLYKDLIDHLCKDE 656


>ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124359684|gb|ABD32353.2| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355509333|gb|AES90475.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/90 (57%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
 Frame = -2

Query: 277 KGIM-PNLQSFKLLIKAFCRIGEFTPAQEVFDISLSIFGHKEALYSLMFNELLARGEAME 101
           KG++ PN+ SFK+LIKAFC+ G+F  A E+FD++LS+ GHKEALYSLMFNELLA G+  +
Sbjct: 659 KGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFNELLAGGKLSD 718

Query: 100 AKKIFEAALDRCLYLGGFLYKDLFHNLCRE 11
           AK++FEA+L+R L    F+Y+DL   LC++
Sbjct: 719 AKELFEASLERSLLSKNFMYEDLIDKLCKD 748


>ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/89 (58%), Positives = 70/89 (78%)
 Frame = -2

Query: 277 KGIMPNLQSFKLLIKAFCRIGEFTPAQEVFDISLSIFGHKEALYSLMFNELLARGEAMEA 98
           KGI PN+ +F++LI AF +  +F  AQE+F+I+LS+ GHKE+LYS MFNELLA GE ++A
Sbjct: 663 KGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKA 722

Query: 97  KKIFEAALDRCLYLGGFLYKDLFHNLCRE 11
           K++FEAALDR L L  FLY+DL   LC++
Sbjct: 723 KELFEAALDRSLALKNFLYRDLIEKLCKD 751


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