BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037385
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613604.1| Pentatricopeptide repeat-containing protein ...    70   1e-10
ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containi...    63   3e-08
emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]    63   3e-08
ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_002520126.1| pentatricopeptide repeat-containing protein,...    56   3e-06

>ref|XP_003613604.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355514939|gb|AES96562.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
 Frame = -2

Query: 301 MSKLISQGLYIEALKHYKHLHSNSSISCDLNFTFPXXXXXXXXXXXXTQVQILHSQITKL 122
           ++KL++ GLY EAL  Y HLHS+S       FTFP            +Q QILH+ + K 
Sbjct: 7   VTKLVANGLYKEALNLYSHLHSSSPTPN--TFTFPILLKACSNLSSPSQTQILHAHLFKT 64

Query: 121 ALQTHTQTASALMHAYVKLSISLN-TLQLFDEMPEPNIELF 2
              +H  T++AL+ +Y   + S +  L+LFDEMP+P I  F
Sbjct: 65  GFHSHPHTSTALIASYAANTRSFHYALELFDEMPQPTITAF 105


>ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
           [Vitis vinifera] gi|296086418|emb|CBI32007.3| unnamed
           protein product [Vitis vinifera]
          Length = 617

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/97 (37%), Positives = 51/97 (52%)
 Frame = -2

Query: 301 MSKLISQGLYIEALKHYKHLHSNSSISCDLNFTFPXXXXXXXXXXXXTQVQILHSQITKL 122
           ++KL+S G Y EAL  Y  LHS+S +  +  FTFP             Q QILH+Q+ K 
Sbjct: 5   IAKLVSNGFYREALSLYSKLHSSSVL--EHKFTFPFLLKASAKLNSPLQGQILHTQLIKT 62

Query: 121 ALQTHTQTASALMHAYVKLSISLNTLQLFDEMPEPNI 11
                   A+AL   Y+KL +    L++F+EMP  N+
Sbjct: 63  GFHLDIYAATALADMYMKLHLLSYALKVFEEMPHRNL 99


>emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
          Length = 677

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/97 (37%), Positives = 51/97 (52%)
 Frame = -2

Query: 301 MSKLISQGLYIEALKHYKHLHSNSSISCDLNFTFPXXXXXXXXXXXXTQVQILHSQITKL 122
           ++KL+S G Y EAL  Y  LHS+S +  +  FTFP             Q QILH+Q+ K 
Sbjct: 65  IAKLVSNGFYREALSLYSKLHSSSVL--EHKFTFPFLLKASAKLNSPLQGQILHTQLIKT 122

Query: 121 ALQTHTQTASALMHAYVKLSISLNTLQLFDEMPEPNI 11
                   A+AL   Y+KL +    L++F+EMP  N+
Sbjct: 123 GFHLDIYAATALADMYMKLHLLSYALKVFEEMPHRNL 159


>ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02750-like [Glycine max]
          Length = 627

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
 Frame = -2

Query: 301 MSKLISQGLYIEALKHYKHLHSNSSISCDLNFTFPXXXXXXXXXXXXTQVQILHSQITKL 122
           ++KL+S G Y EAL  + HLHS SS +   +FTFP            +  Q LH+ + K 
Sbjct: 8   LAKLVSDGFYREALSLFSHLHSCSSHTLH-SFTFPTLFKACTNLRSPSHTQTLHAHLLKT 66

Query: 121 ALQTHTQTASALMHAY-VKLSISLNTLQLFDEMPEPNI 11
              +    +SAL  AY       L+ L+ FDEMP+PN+
Sbjct: 67  GFHSDPYASSALTAAYAANPRHFLDALKAFDEMPQPNV 104


>ref|XP_002520126.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540618|gb|EEF42181.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 593

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/94 (32%), Positives = 49/94 (52%)
 Frame = -2

Query: 295 KLISQGLYIEALKHYKHLHSNSSISCDLNFTFPXXXXXXXXXXXXTQVQILHSQITKLAL 116
           KL++ G Y EA+  +  LHS S       FTFP             Q QI+H+ + K   
Sbjct: 110 KLVANGFYKEAISLHSRLHSASIHPHQ--FTFPALLKACAKLNSPLQAQIIHTHLIKTGF 167

Query: 115 QTHTQTASALMHAYVKLSISLNTLQLFDEMPEPN 14
             +  TA+AL   Y++L++  + +++FDEMP+ N
Sbjct: 168 NLNIYTATALTSMYMQLALLPDAMKVFDEMPDRN 201