BLASTX nr result
ID: Lithospermum22_contig00037356
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00037356
(654 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 67 8e-22
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811... 65 8e-20
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777... 63 2e-19
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 62 9e-19
emb|CAN74319.1| hypothetical protein VITISV_035345 [Vitis vinifera] 51 2e-12
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 489
Score = 67.0 bits (162), Expect(3) = 8e-22
Identities = 35/96 (36%), Positives = 54/96 (56%)
Frame = -2
Query: 305 LLVKYLGILLSSKNLTSNDYIILVGRICSKINS*QSRHLSLGGKAELVKFSIFGV*NF*C 126
L V+YLG+ L +K L+S DY+ L+ I KI S +R LS G+ L+ ++ + NF
Sbjct: 149 LPVRYLGLPLVTKQLSSTDYLPLIEHIKKKIGSWSARFLSYAGRLNLISSVLWSICNFWM 208
Query: 125 ANLPIPKYVIEEVKKRVRSFLWSGKGEGPYRAKISW 18
+P+ I E+ K ++LWSG +AKI+W
Sbjct: 209 GAFRLPRECIREIDKMCSAYLWSGGDLNTSKAKIAW 244
Score = 59.7 bits (143), Expect(3) = 8e-22
Identities = 26/61 (42%), Positives = 43/61 (70%)
Frame = -1
Query: 654 FVSSRGLRQGNPIFSYLFILVLQIFNGLMRKDSNAPGFKFHPNSQQLGITHLSFANDMVL 475
F S+RGLRQG + YLF++ + + + L+ K + F +HP +Q+G+THLSFA+D+++
Sbjct: 32 FNSTRGLRQGCSLSPYLFVVSMNVLSKLLDKATGQRRFGYHPRCKQMGLTHLSFADDLMV 91
Query: 474 L 472
L
Sbjct: 92 L 92
Score = 22.7 bits (47), Expect(3) = 8e-22
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = -3
Query: 442 IKEALTLFGNLIGLRLNCSKSKIFFG----SSPKFVRA 341
I E F GLR++ KS ++F +SP+ V A
Sbjct: 103 IVEVFETFAKCSGLRISMEKSTVYFAGLSHTSPQEVMA 140
>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
Length = 1441
Score = 64.7 bits (156), Expect(3) = 8e-20
Identities = 32/98 (32%), Positives = 57/98 (58%)
Frame = -2
Query: 305 LLVKYLGILLSSKNLTSNDYIILVGRICSKINS*QSRHLSLGGKAELVKFSIFGV*NF*C 126
L V+YLG+ LS K LT Y+ L+ +I ++ S+ LS G+ +LVK + +
Sbjct: 1076 LPVRYLGVPLSCKRLTIQQYMPLIDKIVDRVKHWTSKLLSYAGRIQLVKSITSAIAMYWM 1135
Query: 125 ANLPIPKYVIEEVKKRVRSFLWSGKGEGPYRAKISWNT 12
P+P++V+ ++ RSF+W+GK E ++ ++W+T
Sbjct: 1136 QCFPLPQFVLRKINAICRSFVWTGKQEISKKSLVAWDT 1173
Score = 51.6 bits (122), Expect(3) = 8e-20
Identities = 21/66 (31%), Positives = 41/66 (62%)
Frame = -1
Query: 648 SSRGLRQGNPIFSYLFILVLQIFNGLMRKDSNAPGFKFHPNSQQLGITHLSFANDMVLLV 469
+ RG+RQG+P+ LF+++++ + + K P F H +++G+T+L+FA+D++L
Sbjct: 961 AKRGIRQGDPMSPMLFVIIMEYLHRTLVKMQQNPDFNHHSKCEKIGLTNLTFADDVLLFC 1020
Query: 468 LADMDS 451
D S
Sbjct: 1021 RGDSKS 1026
Score = 26.2 bits (56), Expect(3) = 8e-20
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -3
Query: 445 IIKEALTLFGNLIGLRLNCSKSKIFFGSSPKFVRATLCS*MDMSEG 308
++ E + F + GL++N +K ++FFG + L D +EG
Sbjct: 1029 MMMETIRKFSDSTGLKVNPAKCQMFFGGMDGCSKENLRRITDFAEG 1074
>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
Length = 1324
Score = 63.2 bits (152), Expect(3) = 2e-19
Identities = 32/98 (32%), Positives = 57/98 (58%)
Frame = -2
Query: 305 LLVKYLGILLSSKNLTSNDYIILVGRICSKINS*QSRHLSLGGKAELVKFSIFGV*NF*C 126
L V+YLG+ LS K LT Y+ L+ +I ++ S+ LS G+ +LVK + +
Sbjct: 959 LPVRYLGMPLSCKRLTIQQYMPLIDKIVDRVKHWTSKLLSHAGRIQLVKSITSAIAMYWM 1018
Query: 125 ANLPIPKYVIEEVKKRVRSFLWSGKGEGPYRAKISWNT 12
P+P++V+ ++ RSF+W+GK E ++ ++W+T
Sbjct: 1019 QCFPLPQFVLRKINDICRSFVWTGKQEISKKSLVAWDT 1056
Score = 51.6 bits (122), Expect(3) = 2e-19
Identities = 21/66 (31%), Positives = 41/66 (62%)
Frame = -1
Query: 648 SSRGLRQGNPIFSYLFILVLQIFNGLMRKDSNAPGFKFHPNSQQLGITHLSFANDMVLLV 469
+ RG+RQG+P+ LF+++++ + + K P F H +++G+T+L+FA+D++L
Sbjct: 844 AKRGIRQGDPMSPMLFVIIMEYMHRTLVKMQQNPDFNHHSKCEKIGLTNLTFADDVLLFC 903
Query: 468 LADMDS 451
D S
Sbjct: 904 RGDSKS 909
Score = 26.2 bits (56), Expect(3) = 2e-19
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -3
Query: 445 IIKEALTLFGNLIGLRLNCSKSKIFFGSSPKFVRATLCS*MDMSEG 308
++ E + F + GL++N +K ++FFG + L D +EG
Sbjct: 912 MMMETIRKFSDSTGLKVNPAKCQMFFGGMDGCSKENLRRITDFAEG 957
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 61.6 bits (148), Expect(3) = 9e-19
Identities = 34/98 (34%), Positives = 54/98 (55%)
Frame = -2
Query: 305 LLVKYLGILLSSKNLTSNDYIILVGRICSKINS*QSRHLSLGGKAELVKFSIFGV*NF*C 126
L V+YL + L +K TS DY L+ +I +I + +R LS G+ LV ++ + NF
Sbjct: 285 LPVRYLCLPLVTKRFTSQDYSPLLEQIKRRIGTWTARFLSYAGRLNLVSSVLWSICNFWL 344
Query: 125 ANLPIPKYVIEEVKKRVRSFLWSGKGEGPYRAKISWNT 12
+ +P+ + E+ K +FLWSG +AKI+W T
Sbjct: 345 SAFRLPRECVREIDKLCSAFLWSGPELSTNKAKIAWET 382
Score = 56.2 bits (134), Expect(3) = 9e-19
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = -1
Query: 654 FVSSRGLRQGNPIFSYLFILVLQIFNGLMRKDSNAPGFKFHPNSQQLGITHLSFANDMVL 475
F S RGLRQG + YLF++V+ + + + + + F +HP + LG+THLSFA+D+++
Sbjct: 168 FNSLRGLRQGCSLTPYLFVIVMDVLSKKLDRAAGLRKFGYHPKCKNLGLTHLSFADDIMV 227
Query: 474 L 472
L
Sbjct: 228 L 228
Score = 21.2 bits (43), Expect(3) = 9e-19
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 442 IKEALTLFGNLIGLRLNCSKSKIFFGSSPKFV 347
I E F GL+++ +K+ I+F K V
Sbjct: 239 IVEVFDSFAKQSGLKISMAKTTIYFAGISKSV 270
>emb|CAN74319.1| hypothetical protein VITISV_035345 [Vitis vinifera]
Length = 1802
Score = 51.2 bits (121), Expect(3) = 2e-12
Identities = 28/94 (29%), Positives = 50/94 (53%)
Frame = -2
Query: 299 VKYLGILLSSKNLTSNDYIILVGRICSKINS*QSRHLSLGGKAELVKFSIFGV*NF*CAN 120
+ YLG+ L +S+ + ++ RI S+++ Q +LS GG+ L++ + + + +
Sbjct: 1482 ILYLGLPLGGNPKSSSFWDPVIERISSRLDGWQKAYLSFGGRITLIRSCLTHMPCYFLSL 1541
Query: 119 LPIPKYVIEEVKKRVRSFLWSGKGEGPYRAKISW 18
IP V +++ R FLWSG GEG +SW
Sbjct: 1542 FKIPASVAVRIERLQRDFLWSGVGEGKRDHLVSW 1575
Score = 38.9 bits (89), Expect(3) = 2e-12
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = -1
Query: 648 SSRGLRQGNPIFSYLFILVLQIFNGLMRKDSNAPGFK-FHPNSQQLGITHLSFANDMV 478
+SRGLRQG+P+ +LF +V + + ++ + F+ F + ++HL FA+D +
Sbjct: 1364 TSRGLRQGDPLSPFLFTIVADVMSRMLLRAEERNVFEGFRVGRNRTRVSHLQFADDTI 1421
Score = 26.9 bits (58), Expect(3) = 2e-12
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 442 IKEALTLFGNLIGLRLNCSKSKIF 371
+K L +FG++ GL++N KS I+
Sbjct: 1434 LKSVLLVFGHISGLKVNLDKSNIY 1457