BLASTX nr result

ID: Lithospermum22_contig00037354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037354
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi...   122   3e-26
ref|XP_002320703.1| predicted protein [Populus trichocarpa] gi|2...   111   5e-23
ref|XP_004161545.1| PREDICTED: LOW QUALITY PROTEIN: poly(A)-spec...   103   1e-20

>ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|222862012|gb|EEE99554.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  129 bits (323), Expect = 3e-28
 Identities = 66/114 (57%), Positives = 77/114 (67%), Gaps = 3/114 (2%)
 Frame = -1

Query: 333 ILQRRLLCTKTTPLLHP---NLLLKQVTKSNFPKSLQDLKTHXXXXXXXXXXXQKTGAFC 163
           +LQRRLL T  T   H       +KQVTKSNF  +L+D+K+H           Q TG F 
Sbjct: 7   LLQRRLLSTSVTRTHHKPQQQWSVKQVTKSNFADTLEDIKSHVSNSDFVAVSLQNTGFFS 66

Query: 162 SSWQRVVPFDTTEIAYLKCKYAAERFQVLQFAVCPFSVKESKIIAYPYNFHLFP 1
           + WQRV PFDT + AYLK KYAAERFQVL FAVCPF+V+ SK+ AYPYNFHLFP
Sbjct: 67  APWQRVSPFDTADTAYLKAKYAAERFQVLHFAVCPFTVRASKVTAYPYNFHLFP 120


>ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|222835296|gb|EEE73731.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  128 bits (322), Expect = 4e-28
 Identities = 66/114 (57%), Positives = 78/114 (68%), Gaps = 3/114 (2%)
 Frame = -1

Query: 333 ILQRRLLCT---KTTPLLHPNLLLKQVTKSNFPKSLQDLKTHXXXXXXXXXXXQKTGAFC 163
           +LQRRLL T   KT    H    +KQVTKSNF  +L+D+K+H           Q TG+F 
Sbjct: 7   LLQRRLLSTSVTKTHHKPHQQWSIKQVTKSNFADTLKDIKSHVSNSDFVAVSLQNTGSFS 66

Query: 162 SSWQRVVPFDTTEIAYLKCKYAAERFQVLQFAVCPFSVKESKIIAYPYNFHLFP 1
           + WQRV PFDT + AYLK KYAAERFQVL FAVCP +V+ SK+ AYPYNFHLFP
Sbjct: 67  APWQRVSPFDTADTAYLKAKYAAERFQVLHFAVCPITVRASKVTAYPYNFHLFP 120


>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis]
           gi|223533357|gb|EEF35108.1| ribonuclease, putative
           [Ricinus communis]
          Length = 624

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/116 (52%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
 Frame = -1

Query: 339 PQILQRRLLCTKT---TPLLHPNLLLKQVTKSNFPKSLQDLKTHXXXXXXXXXXXQKTGA 169
           P  LQRRL CTK        H    +KQ+TKSNF  SL ++ +H           + TG+
Sbjct: 7   PLRLQRRLFCTKIHHHRAHTHNQWNVKQITKSNFADSLPEINSHIMCSDFISISLKTTGS 66

Query: 168 FCSSWQRVVPFDTTEIAYLKCKYAAERFQVLQFAVCPFSVKESKIIAYPYNFHLFP 1
           F S W RV PFDT ++AYLK K+AAE+FQ+LQ AVCPF+V  SK+ AYPYNFHLFP
Sbjct: 67  FSSPWHRVSPFDTPDVAYLKSKHAAEKFQILQLAVCPFTVSASKVTAYPYNFHLFP 122


>ref|XP_002320703.1| predicted protein [Populus trichocarpa] gi|222861476|gb|EEE99018.1|
           predicted protein [Populus trichocarpa]
          Length = 544

 Score =  111 bits (278), Expect = 5e-23
 Identities = 59/107 (55%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
 Frame = -1

Query: 333 ILQRRLLCT---KTTPLLHPNLLLKQVTKSNFPKSLQDLKTHXXXXXXXXXXXQKTGAFC 163
           +LQRRLL T   KT    H    +KQVTKSNF  +L+D+K+H           Q TG+F 
Sbjct: 7   LLQRRLLSTSVTKTHHKPHQQWSIKQVTKSNFADTLKDIKSHVSNSDFVAVSLQNTGSFS 66

Query: 162 SSWQRVVPFDTTEIAYLKCKYAAERFQVLQFAVCPFSVKESKIIAYP 22
           + WQRV PFDT + AYLK KYAAERFQVL FAVCP +V+ SK+ AYP
Sbjct: 67  APWQRVSPFDTADTAYLKAKYAAERFQVLHFAVCPITVRASKVTAYP 113


>ref|XP_004161545.1| PREDICTED: LOW QUALITY PROTEIN: poly(A)-specific ribonuclease
           PARN-like [Cucumis sativus]
          Length = 610

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/91 (52%), Positives = 64/91 (70%)
 Frame = -1

Query: 273 LKQVTKSNFPKSLQDLKTHXXXXXXXXXXXQKTGAFCSSWQRVVPFDTTEIAYLKCKYAA 94
           ++QV  SNF  SL+DLK             Q+TG+    W R+ PFDT + AY K KYAA
Sbjct: 23  VRQVRNSNFLGSLEDLKNDISDSDFIALSLQRTGSSSFPWHRLQPFDTHDTAYCKAKYAA 82

Query: 93  ERFQVLQFAVCPFSVKESKIIAYPYNFHLFP 1
           E+FQ++QF++CPFSV++SK+IA+PYNFHLFP
Sbjct: 83  EKFQIIQFSLCPFSVRDSKLIAHPYNFHLFP 113


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