BLASTX nr result

ID: Lithospermum22_contig00037235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037235
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    51   4e-13
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              50   4e-13
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    52   1e-12
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    48   6e-12
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    48   2e-11

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 50.8 bits (120), Expect(2) = 4e-13
 Identities = 23/57 (40%), Positives = 34/57 (59%)
 Frame = +2

Query: 164 KEVMIKSVTSAIPIYVMNCFKXXXXXXXXXXXXMAKFF*GNTEGDKGIH*KSWEKLC 334
           KEVMIKSV + +P YVM+CF+            +AKF+  +    +G+H  +W+KLC
Sbjct: 573 KEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWDKLC 629



 Score = 48.1 bits (113), Expect(2) = 4e-13
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = +3

Query: 12  VLGIREVEDQGEYLGFPLQIGRSKQEIFSYTAGNVEDKMRGWMGKMLSQAG 164
           +LGI  +   G YLG P  +G SK ++FS+    ++ ++ GW  K LS+ G
Sbjct: 522 ILGIHNLGGMGSYLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGG 572


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 50.1 bits (118), Expect(2) = 4e-13
 Identities = 23/57 (40%), Positives = 33/57 (57%)
 Frame = +2

Query: 164 KEVMIKSVTSAIPIYVMNCFKXXXXXXXXXXXXMAKFF*GNTEGDKGIH*KSWEKLC 334
           KEVMIKSV + +P YVM+CF+            +AKF+  +    +G+H  +W KLC
Sbjct: 639 KEVMIKSVVAVLPTYVMSCFRLPKTITSKLTSAVAKFWWSSDGESRGMHWMAWNKLC 695



 Score = 48.9 bits (115), Expect(2) = 4e-13
 Identities = 21/52 (40%), Positives = 29/52 (55%)
 Frame = +3

Query: 9   SVLGIREVEDQGEYLGFPLQIGRSKQEIFSYTAGNVEDKMRGWMGKMLSQAG 164
           S LGI  +   G YLG P  +G SK  IFS+    ++ ++ GW  K LS+ G
Sbjct: 587 SALGIHSIGGMGSYLGLPESLGGSKTRIFSFVRDRLQTRINGWSAKFLSKGG 638


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 52.0 bits (123), Expect(2) = 1e-12
 Identities = 23/54 (42%), Positives = 37/54 (68%)
 Frame = +3

Query: 3   LISVLGIREVEDQGEYLGFPLQIGRSKQEIFSYTAGNVEDKMRGWMGKMLSQAG 164
           +++VLG++EV+ Q +YLG P  IGRSK+  F+     +  K++GW  K+LS+ G
Sbjct: 738 IVNVLGVKEVDRQEKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPG 791



 Score = 45.8 bits (107), Expect(2) = 1e-12
 Identities = 21/57 (36%), Positives = 34/57 (59%)
 Frame = +2

Query: 164 KEVMIKSVTSAIPIYVMNCFKXXXXXXXXXXXXMAKFF*GNTEGDKGIH*KSWEKLC 334
           KEV+IKSV  AIP Y+M+ F             +A+F+ G+++ ++ +H  SW+ LC
Sbjct: 792 KEVLIKSVAQAIPTYMMSVFSLPSGLIDEIHSLLARFWWGSSDTNRKMHWHSWDTLC 848


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 47.8 bits (112), Expect(2) = 6e-12
 Identities = 21/57 (36%), Positives = 34/57 (59%)
 Frame = +2

Query: 164 KEVMIKSVTSAIPIYVMNCFKXXXXXXXXXXXXMAKFF*GNTEGDKGIH*KSWEKLC 334
           KEV++KSV  AIP Y+M  +K            MA+F+ G+++  + IH K+W+ +C
Sbjct: 793 KEVLLKSVIQAIPTYLMGVYKFPVFIIQKIQSAMARFWWGSSDTQRKIHWKNWDSMC 849



 Score = 47.4 bits (111), Expect(2) = 6e-12
 Identities = 22/54 (40%), Positives = 34/54 (62%)
 Frame = +3

Query: 3   LISVLGIREVEDQGEYLGFPLQIGRSKQEIFSYTAGNVEDKMRGWMGKMLSQAG 164
           L ++L +R+V+   +YLG P   GRSK+ IF      +  K++GW  K+LS+AG
Sbjct: 739 LTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQGWKEKLLSRAG 792


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 48.1 bits (113), Expect(2) = 2e-11
 Identities = 23/54 (42%), Positives = 35/54 (64%)
 Frame = +3

Query: 3   LISVLGIREVEDQGEYLGFPLQIGRSKQEIFSYTAGNVEDKMRGWMGKMLSQAG 164
           LI++L +R+V+   +YLG P   GRSK+ +F      +  K+RGW  K+LS+AG
Sbjct: 742 LITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAG 795



 Score = 45.4 bits (106), Expect(2) = 2e-11
 Identities = 21/57 (36%), Positives = 32/57 (56%)
 Frame = +2

Query: 164 KEVMIKSVTSAIPIYVMNCFKXXXXXXXXXXXXMAKFF*GNTEGDKGIH*KSWEKLC 334
           KEV+IK+V  A+P Y+M  +K            MA+F+ G    ++ +H  SWEK+C
Sbjct: 796 KEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWGGKGDERKMHWLSWEKMC 852


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