BLASTX nr result

ID: Lithospermum22_contig00037212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037212
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513024.1| conserved hypothetical protein [Ricinus comm...    92   3e-17
ref|XP_002520664.1| conserved hypothetical protein [Ricinus comm...    89   3e-16
ref|NP_568185.1| Mitochondrial transcription termination factor ...    89   4e-16
ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263...    89   5e-16
emb|CAN65474.1| hypothetical protein VITISV_018244 [Vitis vinifera]    89   5e-16

>ref|XP_002513024.1| conserved hypothetical protein [Ricinus communis]
           gi|223548035|gb|EEF49527.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1520

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/106 (41%), Positives = 63/106 (59%)
 Frame = -3

Query: 319 QISQLVSRYPEILKANAERTILPKLDFFVSMGVPNSVLGIALSYYPGIFSRSLSKMLIPS 140
           QIS+++ ++PE L AN E+ I PK++FF+S G   + L    +YYP +FSRSL   LIPS
Sbjct: 57  QISKIIRKFPETLSANLEKNIFPKVEFFISKGASTTDLIRIFTYYPWLFSRSLENQLIPS 116

Query: 139 YNYVKSFVGTDAKVAYVFKRSPRFFVDGFRREVVENIAKLRDYGVP 2
           +N+ + F  +D K     KR P         +V+ NI  L +YGVP
Sbjct: 117 FNFFRDFHHSDEKTIAAIKRYPIILTRRLEADVIPNINTLHEYGVP 162


>ref|XP_002520664.1| conserved hypothetical protein [Ricinus communis]
           gi|223540049|gb|EEF41626.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/105 (42%), Positives = 67/105 (63%)
 Frame = -3

Query: 319 QISQLVSRYPEILKANAERTILPKLDFFVSMGVPNSVLGIALSYYPGIFSRSLSKMLIPS 140
           QIS LV + P +L A+ + T+LPKL+FF S+G  NS L  ALS  P + +RSL   +IPS
Sbjct: 110 QISSLVKKRPFLLLAHPQNTLLPKLEFFYSIGASNSALARALSSDPTLLTRSLENQIIPS 169

Query: 139 YNYVKSFVGTDAKVAYVFKRSPRFFVDGFRREVVENIAKLRDYGV 5
           YN++KS + +D K+    KR+   F++   + ++ NI  LR+ GV
Sbjct: 170 YNFLKSILLSDEKIVSALKRTTWIFLEDHSKNLIPNIELLREAGV 214


>ref|NP_568185.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana]
           gi|13878065|gb|AAK44110.1|AF370295_1 unknown protein
           [Arabidopsis thaliana] gi|6562304|emb|CAB62602.1|
           putative protein [Arabidopsis thaliana]
           gi|10176724|dbj|BAB09954.1| unnamed protein product
           [Arabidopsis thaliana] gi|17104655|gb|AAL34216.1|
           unknown protein [Arabidopsis thaliana]
           gi|21592327|gb|AAM64278.1| unknown [Arabidopsis
           thaliana] gi|332003836|gb|AED91219.1| Mitochondrial
           transcription termination factor family protein
           [Arabidopsis thaliana]
          Length = 405

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/106 (43%), Positives = 67/106 (63%)
 Frame = -3

Query: 319 QISQLVSRYPEILKANAERTILPKLDFFVSMGVPNSVLGIALSYYPGIFSRSLSKMLIPS 140
           QIS LV + P +L ANAE  +LPKL FF+S+GV  S+L   L+  P I +RSL   LIPS
Sbjct: 117 QISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPS 176

Query: 139 YNYVKSFVGTDAKVAYVFKRSPRFFVDGFRREVVENIAKLRDYGVP 2
           YN++KS + +D K+    +R+   F++   + +V NI  + + GVP
Sbjct: 177 YNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVP 222


>ref|XP_002271867.1| PREDICTED: uncharacterized protein LOC100263451 [Vitis vinifera]
          Length = 412

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/106 (42%), Positives = 66/106 (62%)
 Frame = -3

Query: 319 QISQLVSRYPEILKANAERTILPKLDFFVSMGVPNSVLGIALSYYPGIFSRSLSKMLIPS 140
           Q+ +L+  YP +L A+ E+T+LPKL+FF S     + LG  LS  P I SRSL   +IP 
Sbjct: 109 QLPKLLRVYPTLLLADPEKTLLPKLEFFHSKAFTRADLGSILSSCPMILSRSLDYQIIPC 168

Query: 139 YNYVKSFVGTDAKVAYVFKRSPRFFVDGFRREVVENIAKLRDYGVP 2
           Y+++KS +  D +V   FKRSPR F++   + +V  I  L++ GVP
Sbjct: 169 YDFLKSILHLDKRVVSAFKRSPRIFLEDVNKYIVPKITALQEIGVP 214


>emb|CAN65474.1| hypothetical protein VITISV_018244 [Vitis vinifera]
          Length = 455

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/106 (42%), Positives = 66/106 (62%)
 Frame = -3

Query: 319 QISQLVSRYPEILKANAERTILPKLDFFVSMGVPNSVLGIALSYYPGIFSRSLSKMLIPS 140
           Q+ +L+  YP +L A+ E+T+LPKL+FF S     + LG  LS  P I SRSL   +IP 
Sbjct: 109 QLPKLLRVYPTLLLADPEKTLLPKLEFFHSKAFTRADLGSILSSCPMILSRSLDYQIIPC 168

Query: 139 YNYVKSFVGTDAKVAYVFKRSPRFFVDGFRREVVENIAKLRDYGVP 2
           Y+++KS +  D +V   FKRSPR F++   + +V  I  L++ GVP
Sbjct: 169 YDFLKSILHLDKRVVSAFKRSPRIFLEDVNKYIVPKITALQEIGVP 214


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