BLASTX nr result
ID: Lithospermum22_contig00037176
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00037176
(478 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi... 192 2e-47
ref|XP_002525881.1| pentatricopeptide repeat-containing protein,... 186 2e-45
ref|XP_002514422.1| pentatricopeptide repeat-containing protein,... 179 2e-43
ref|XP_002305039.1| predicted protein [Populus trichocarpa] gi|2... 163 1e-38
ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containi... 160 8e-38
>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 192 bits (488), Expect = 2e-47
Identities = 90/158 (56%), Positives = 124/158 (78%)
Frame = +2
Query: 5 MTSKGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGK 184
M S GIKTNCVI++SIL+CL + G+ SEVV+QF F++SG+F D+V+YN ++ALCKLGK
Sbjct: 358 MVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGK 417
Query: 185 MEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNV 364
+EEAV+LLN+MK + DVVHYTTLI GYCL G+L DA+ +FE +K+ G++ D VTYN+
Sbjct: 418 VEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNI 477
Query: 365 LISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLIIK 478
L+ F +NGL K+AL +L+ + QGL PNS ++N II+
Sbjct: 478 LVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIE 515
Score = 67.8 bits (164), Expect = 9e-10
Identities = 33/127 (25%), Positives = 68/127 (53%)
Frame = +2
Query: 95 EQFNNFKNSGVFFDKVVYNTAIEALCKLGKMEEAVDLLNDMKRDEVVPDVVHYTTLIHGY 274
E F+ G+ K + +LC G+ ++A+ LL M +V P+ + Y LI +
Sbjct: 559 ELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAF 618
Query: 275 CLHGRLSDAEKLFERLKDVGVKSDTVTYNVLISAFLKNGLAKKALGVLNYVKEQGLIPNS 454
C G + A+ +F+ L + G+ D +TY ++I+ + + ++A + N +KE+G+ P+
Sbjct: 619 CRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDV 678
Query: 455 DSYNLII 475
+Y +++
Sbjct: 679 ITYTVVL 685
Score = 66.2 bits (160), Expect = 3e-09
Identities = 40/175 (22%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Frame = +2
Query: 5 MTSKGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGK 184
M + ++ N ++ ++ + G F+ G+ D + Y I C++
Sbjct: 599 MLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNC 658
Query: 185 MEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLS------------------DAEKL 310
+ EA D+ NDMK + PDV+ YT ++ G H +++ DA
Sbjct: 659 LREARDIFNDMKERGIKPDVITYTVVLDG---HSKVNLKMARSLQFSKGSEEEKMDASPF 715
Query: 311 FERLKDVGVKSDTVTYNVLISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLII 475
+ +K++G+K D V Y VLI + K + A+ + + + +GL P+ +Y ++
Sbjct: 716 WSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALL 770
Score = 65.9 bits (159), Expect = 3e-09
Identities = 37/130 (28%), Positives = 66/130 (50%)
Frame = +2
Query: 86 EVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGKMEEAVDLLNDMKRDEVVPDVVHYTTLI 265
E + F + N G+ D +Y I A CK G + +AV L NDM + + + V ++++
Sbjct: 315 EAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSIL 374
Query: 266 HGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNVLISAFLKNGLAKKALGVLNYVKEQGLI 445
C G S+ F+ +D G+ D V YN+++ A K G ++A+ +LN +K + +
Sbjct: 375 QCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMS 434
Query: 446 PNSDSYNLII 475
+ Y +I
Sbjct: 435 LDVVHYTTLI 444
Score = 65.5 bits (158), Expect = 4e-09
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Frame = +2
Query: 2 VMTSKGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKL- 178
++ +GI + + ++ + E + FN+ K G+ D + Y ++ K+
Sbjct: 633 MLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVN 692
Query: 179 -----------GKMEEAVD---LLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFE 316
G EE +D ++MK + PDVV YT LI +C L DA L++
Sbjct: 693 LKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYD 752
Query: 317 RLKDVGVKSDTVTYNVLISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLI 472
+ G++ D VTY L+S+ G +A+ ++N + +G+ P+S + +++
Sbjct: 753 EMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVL 804
Score = 64.7 bits (156), Expect = 7e-09
Identities = 41/154 (26%), Positives = 67/154 (43%)
Frame = +2
Query: 14 KGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGKMEE 193
+G + + N ++ L + G V + + K G+ + Y I+ALC+ G EE
Sbjct: 186 RGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEE 245
Query: 194 AVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNVLIS 373
AVD+ +M+ V P+ V +T I G C H R + L+ DT Y +I
Sbjct: 246 AVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIR 305
Query: 374 AFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLII 475
F K+A V + +G+ P+ Y +I
Sbjct: 306 GFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALI 339
Score = 64.3 bits (155), Expect = 1e-08
Identities = 40/145 (27%), Positives = 67/145 (46%)
Frame = +2
Query: 17 GIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGKMEEA 196
G+ N +K L +KG E V+ F + +GV + V +T IE LC + +
Sbjct: 222 GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLG 281
Query: 197 VDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNVLISA 376
+ L ++ D YT +I G+C +L +AE +F + + G+ D Y LI A
Sbjct: 282 YEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHA 341
Query: 377 FLKNGLAKKALGVLNYVKEQGLIPN 451
+ K G +A+ + N + G+ N
Sbjct: 342 YCKAGNLLQAVALHNDMVSNGIKTN 366
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/157 (22%), Positives = 66/157 (42%)
Frame = +2
Query: 5 MTSKGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGK 184
M G+ N V ++ ++ L E + + D Y I C K
Sbjct: 253 MEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMK 312
Query: 185 MEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNV 364
++EA D+ DM + + PD Y LIH YC G L A L + G+K++ V +
Sbjct: 313 LKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSS 372
Query: 365 LISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLII 475
++ + G+A + + ++ G+ + YN+++
Sbjct: 373 ILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVV 409
Score = 60.8 bits (146), Expect = 1e-07
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 35/192 (18%)
Frame = +2
Query: 5 MTSKGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGK 184
M +GI+ + V N ++ + GL E +E + G+ + +N IE LC GK
Sbjct: 463 MKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGK 522
Query: 185 MEEAVDLLNDMKRDEVVPDVVHYTTLIHGY------------------------------ 274
++EA LN ++ D+ + +Y+ ++ GY
Sbjct: 523 VKEAEAFLNTLE-DKCLE---NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFK 578
Query: 275 -----CLHGRLSDAEKLFERLKDVGVKSDTVTYNVLISAFLKNGLAKKALGVLNYVKEQG 439
C+ G A L ER+ + V+ + + Y LI AF ++G K+A V + + E+G
Sbjct: 579 LLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERG 638
Query: 440 LIPNSDSYNLII 475
+ P+ +Y ++I
Sbjct: 639 ITPDVITYTMMI 650
Score = 58.5 bits (140), Expect = 5e-07
Identities = 29/105 (27%), Positives = 57/105 (54%)
Frame = +2
Query: 140 VVYNTAIEALCKLGKMEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFER 319
+V + ++A ++G +EA+D L KR VP ++ L++ HG++ A ++
Sbjct: 158 LVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRH 217
Query: 320 LKDVGVKSDTVTYNVLISAFLKNGLAKKALGVLNYVKEQGLIPNS 454
LK +G+ + TY + I A + G ++A+ V ++E G+ PN+
Sbjct: 218 LKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNA 262
>ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534795|gb|EEF36485.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 913
Score = 186 bits (471), Expect = 2e-45
Identities = 85/158 (53%), Positives = 122/158 (77%)
Frame = +2
Query: 5 MTSKGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGK 184
M SKG+K NCVI+ SIL CL + G+ SEVV+QFN FK+ G+F D V YN ++ALCKLGK
Sbjct: 364 MMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNNVVDALCKLGK 423
Query: 185 MEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNV 364
+EEA+ LL++MK ++ DV+HYTTLI+GYC G + DA K+FE +++ G++ D VTY+V
Sbjct: 424 LEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEIDVVTYDV 483
Query: 365 LISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLIIK 478
L+S F +NGLA +AL +L+Y++ Q L PNS +YN++++
Sbjct: 484 LVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVE 521
Score = 66.6 bits (161), Expect = 2e-09
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 15/145 (10%)
Frame = +2
Query: 86 EVVEQFNNFKNSGVFFDKVVYNTAIEALCKL------------GKMEEAVDLL---NDMK 220
E V+ F++ K G+ D V + ++ K G E+ D L +MK
Sbjct: 669 EAVDLFHDMKQRGIKPDLVTFTVLLDGHHKAHIKKVYSAANAKGGNEDIFDALAIWTEMK 728
Query: 221 RDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNVLISAFLKNGLAK 400
E+ PDV+ YT LI GYC L DA +F+ + + G++ D +TY L+S + G
Sbjct: 729 DTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQRGDVD 788
Query: 401 KALGVLNYVKEQGLIPNSDSYNLII 475
+A+ +L+ + +G+ P++ + + ++
Sbjct: 789 RAVNLLDQMSLKGISPDTRTMSALL 813
Score = 61.6 bits (148), Expect = 6e-08
Identities = 33/122 (27%), Positives = 57/122 (46%)
Frame = +2
Query: 110 FKNSGVFFDKVVYNTAIEALCKLGKMEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGR 289
+K + + D Y A+ C K ++A +L DM+++ +VPD+ YT LI +C G
Sbjct: 294 WKGANIPLDMYAYTVAVRGFCNELKFDKAESVLRDMEKEGMVPDMHCYTALICRFCKAGN 353
Query: 290 LSDAEKLFERLKDVGVKSDTVTYNVLISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNL 469
L A + GVK + V ++ + G+ + + N K GL + SYN
Sbjct: 354 LLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGLFLDGVSYNN 413
Query: 470 II 475
++
Sbjct: 414 VV 415
Score = 61.2 bits (147), Expect = 8e-08
Identities = 33/122 (27%), Positives = 65/122 (53%)
Frame = +2
Query: 113 KNSGVFFDKVVYNTAIEALCKLGKMEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRL 292
K +F KV Y+ ++A +G ++A+D+L M R VP + L++ + +L
Sbjct: 156 KKQSLFMSKV-YDALVKAYVSVGMFDDAIDVLFQMGRRRFVPHIFICNFLMNSLIKNSKL 214
Query: 293 SDAEKLFERLKDVGVKSDTVTYNVLISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLI 472
A ++++LK +G+ + TY ++I A NG ++A+ V+ ++E G+ P +Y
Sbjct: 215 DMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEMEESGITPTGFAYTAY 274
Query: 473 IK 478
I+
Sbjct: 275 IE 276
Score = 60.5 bits (145), Expect = 1e-07
Identities = 34/146 (23%), Positives = 64/146 (43%)
Frame = +2
Query: 38 IINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGKMEEAVDLLNDM 217
I N ++ L + + + K G+ + Y I+ALC G +EEA+ ++ +M
Sbjct: 200 ICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEEAMYVIKEM 259
Query: 218 KRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNVLISAFLKNGLA 397
+ + P YT I G C++ ++ + K + D Y V + F
Sbjct: 260 EESGITPTGFAYTAYIEGLCVNEMSDLGYQVLQAWKGANIPLDMYAYTVAVRGFCNELKF 319
Query: 398 KKALGVLNYVKEQGLIPNSDSYNLII 475
KA VL ++++G++P+ Y +I
Sbjct: 320 DKAESVLRDMEKEGMVPDMHCYTALI 345
Score = 55.5 bits (132), Expect = 5e-06
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 3/130 (2%)
Frame = +2
Query: 20 IKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGK---ME 190
+K +C ++LK L ++G ++ N V K +Y +LC+ G M
Sbjct: 576 VKRSCCY--NLLKNLCEEGDNDGILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMR 633
Query: 191 EAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNVLI 370
+A + + + + PD++ YT +I YC L +A LF +K G+K D VT+ VL+
Sbjct: 634 KAQSVFDMLLKRGWTPDLIAYTIMITSYCRMNCLKEAVDLFHDMKQRGIKPDLVTFTVLL 693
Query: 371 SAFLKNGLAK 400
K + K
Sbjct: 694 DGHHKAHIKK 703
Score = 55.5 bits (132), Expect = 5e-06
Identities = 25/95 (26%), Positives = 49/95 (51%)
Frame = +2
Query: 101 FNNFKNSGVFFDKVVYNTAIEALCKLGKMEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCL 280
+ K++ + D + Y I+ CK+ + +A+ + ++M + PD++ YT L+ G C
Sbjct: 724 WTEMKDTEIKPDVIFYTVLIDGYCKVDSLHDAIGVFDEMIERGLEPDIITYTALLSGCCQ 783
Query: 281 HGRLSDAEKLFERLKDVGVKSDTVTYNVLISAFLK 385
G + A L +++ G+ DT T + L+ LK
Sbjct: 784 RGDVDRAVNLLDQMSLKGISPDTRTMSALLHGILK 818
>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 809
Score = 179 bits (454), Expect = 2e-43
Identities = 83/158 (52%), Positives = 120/158 (75%)
Frame = +2
Query: 5 MTSKGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGK 184
M SKG+KTNCVI++SIL+ L Q G+ SEV QF FK G+FFD+ YN ++ALCKLGK
Sbjct: 350 MVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVMDALCKLGK 409
Query: 185 MEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNV 364
+EEAV+LL +MK ++VPD+++YTT+I GY L G++ DA ++ +KD+G K D VTYNV
Sbjct: 410 VEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNV 469
Query: 365 LISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLIIK 478
L F +NGL ++AL +LNY++ QG+ P++ ++N+II+
Sbjct: 470 LAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIE 507
Score = 77.8 bits (190), Expect = 8e-13
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 15/172 (8%)
Frame = +2
Query: 5 MTSKGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGK 184
M + I ++ + ++ LFQ G + FN + G+ D + Y I C++ K
Sbjct: 591 MVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNK 650
Query: 185 MEEAVDLLNDMKRDEVVPDVVHYTTLIHGYC---------------LHGRLSDAEKLFER 319
M+EA +L DMK + PDV+ YT L++ + D L+
Sbjct: 651 MKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSE 710
Query: 320 LKDVGVKSDTVTYNVLISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLII 475
+KD+ +K D + Y VLI K + A+ + N + ++GL P++ +Y ++
Sbjct: 711 MKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALL 762
Score = 74.3 bits (181), Expect = 9e-12
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 9/158 (5%)
Frame = +2
Query: 29 NCVIINSILKCLFQKGLPSEVVEQ---------FNNFKNSGVFFDKVVYNTAIEALCKLG 181
+C IL C F L + +VE + K G+ + Y AI+ C+ G
Sbjct: 177 HCGFAPQILSCNF---LMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKG 233
Query: 182 KMEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYN 361
+ EA+D+ DM+ V P+ YTT I G CLHGR K+ + + + + D Y
Sbjct: 234 NLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYT 293
Query: 362 VLISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLII 475
V+I F K+A +L +++QG P+ Y +I
Sbjct: 294 VVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALI 331
Score = 70.1 bits (170), Expect = 2e-10
Identities = 41/145 (28%), Positives = 69/145 (47%)
Frame = +2
Query: 17 GIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGKMEEA 196
G+ N +K +KG +E ++ F + + SGV + Y T IE LC G+ +
Sbjct: 214 GLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLG 273
Query: 197 VDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNVLISA 376
+L D+ ++ DV YT +I G+C +L +AE + ++ G D Y LIS
Sbjct: 274 FKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISG 333
Query: 377 FLKNGLAKKALGVLNYVKEQGLIPN 451
+ G KAL + + + +G+ N
Sbjct: 334 YCMVGNLLKALALHDEMVSKGVKTN 358
Score = 66.6 bits (161), Expect = 2e-09
Identities = 38/157 (24%), Positives = 69/157 (43%)
Frame = +2
Query: 5 MTSKGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGK 184
M G+ N + ++ L G + + N+ + D Y I C K
Sbjct: 245 MEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMK 304
Query: 185 MEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNV 364
++EA +L +M++ PDV Y LI GYC+ G L A L + + GVK++ V +
Sbjct: 305 LKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLLKALALHDEMVSKGVKTNCVILSS 364
Query: 365 LISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLII 475
++ + G+A + K+ G+ + YN+++
Sbjct: 365 ILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVM 401
Score = 64.3 bits (155), Expect = 1e-08
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Frame = +2
Query: 14 KGIKTNCVIIN--SILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGKM 187
KG K IIN +++ F KG + + + K+ G D V YN + G
Sbjct: 421 KGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLT 480
Query: 188 EEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNVL 367
+EA+ LLN M+ V PD V + +I G C+ G++ DA+ F+ L++ +++ Y+ +
Sbjct: 481 QEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAFFDNLEEKCLEN----YSAM 536
Query: 368 ISAFLKNGLAKKALGVLNYVKEQGLIPNSDSY 463
++ + + KA +L + +QG I S+
Sbjct: 537 VNGYCEANHVNKAFALLIRLSKQGRILKKASF 568
>ref|XP_002305039.1| predicted protein [Populus trichocarpa] gi|222848003|gb|EEE85550.1|
predicted protein [Populus trichocarpa]
Length = 800
Score = 163 bits (413), Expect = 1e-38
Identities = 76/158 (48%), Positives = 120/158 (75%)
Frame = +2
Query: 5 MTSKGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGK 184
M SKGIKTNCVI+++IL+ +KG+ S+VVE+F FK+ +F D+V YN ++ALCKL K
Sbjct: 365 MESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNIVVDALCKLEK 424
Query: 185 MEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNV 364
+++AV LL++MK ++ D++HYTTLI+GYC G+L DA ++FE ++ G++ D VT+N+
Sbjct: 425 VDQAVALLDEMKGKQMDMDIMHYTTLINGYCHVGKLVDAFRVFEEMEGKGLEPDVVTFNI 484
Query: 365 LISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLIIK 478
L++AF + GLA +AL + Y+K Q L PN+ ++N++I+
Sbjct: 485 LLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIE 522
Score = 64.3 bits (155), Expect = 1e-08
Identities = 33/122 (27%), Positives = 60/122 (49%)
Frame = +2
Query: 110 FKNSGVFFDKVVYNTAIEALCKLGKMEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGR 289
+K + D Y I C KM+ A +L DM++ E++ D Y+ LI GYC G
Sbjct: 295 WKEGNIPIDVYAYVAVIRGFCNEMKMDRAEVVLGDMEKQELISDARCYSELIRGYCKAGD 354
Query: 290 LSDAEKLFERLKDVGVKSDTVTYNVLISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNL 469
LS A L ++ G+K++ V + ++ F + G+ + + K+ + + SYN+
Sbjct: 355 LSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEFKRFKDLRIFLDEVSYNI 414
Query: 470 II 475
++
Sbjct: 415 VV 416
Score = 62.8 bits (151), Expect = 3e-08
Identities = 35/127 (27%), Positives = 64/127 (50%)
Frame = +2
Query: 5 MTSKGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGK 184
++ +G+ + I +L+ L ++G + + + K +Y I A + G
Sbjct: 571 LSERGLLMDRGYIYKLLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVITACYRAGD 630
Query: 185 MEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNV 364
M A + + +++ + PD+ YTT+I+ C RLS+A LF+ +K G+K D VT+ V
Sbjct: 631 MRNAEAVFDILRKSGLTPDIFTYTTMINVCCRQNRLSEARNLFQDMKHRGIKPDLVTFTV 690
Query: 365 LISAFLK 385
L+ LK
Sbjct: 691 LLDGHLK 697
Score = 62.0 bits (149), Expect = 5e-08
Identities = 40/157 (25%), Positives = 73/157 (46%)
Frame = +2
Query: 5 MTSKGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGK 184
M KG++ + V N +L ++GL +E ++ + K+ + + + +N IE LC GK
Sbjct: 470 MEGKGLEPDVVTFNILLAAFSRRGLANEALKLYEYMKSQDLKPNAITHNVMIEGLCIGGK 529
Query: 185 MEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNV 364
+ EA +M+ + +Y +I GYC A +LF L + G+ D
Sbjct: 530 VTEAEAFFCNMED----KSIDNYGAMITGYCEAKHTEKASELFFELSERGLLMDRGYIYK 585
Query: 365 LISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLII 475
L+ + G +AL +L + + + P+ D Y +I
Sbjct: 586 LLEKLCEEGEKDRALWLLKTMLDLNMEPSKDMYGKVI 622
Score = 61.2 bits (147), Expect = 8e-08
Identities = 29/112 (25%), Positives = 64/112 (57%)
Frame = +2
Query: 143 VYNTAIEALCKLGKMEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERL 322
VY+ +++ G ++EA++ L +KR +P + + L++ +G++ A ++++L
Sbjct: 166 VYDALVKSYVTAGMLDEAINALFQIKRRGFLPHIFTFNYLMNKLIANGKVDAALAIYKQL 225
Query: 323 KDVGVKSDTVTYNVLISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLIIK 478
K +G+ + TY+++I AF + G +A V ++ G+IPN+ +Y I+
Sbjct: 226 KSLGLNPNDYTYSIIIKAFCRKGSLVEASNVFQEMELCGVIPNAYAYTTYIE 277
Score = 59.7 bits (143), Expect = 2e-07
Identities = 36/155 (23%), Positives = 71/155 (45%)
Frame = +2
Query: 14 KGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGKMEE 193
+G + N ++ L G + + K+ G+ + Y+ I+A C+ G + E
Sbjct: 193 RGFLPHIFTFNYLMNKLIANGKVDAALAIYKQLKSLGLNPNDYTYSIIIKAFCRKGSLVE 252
Query: 194 AVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNVLIS 373
A ++ +M+ V+P+ YTT I G C + R ++ + K+ + D Y +I
Sbjct: 253 ASNVFQEMELCGVIPNAYAYTTYIEGLCANQRSDFGYQVLQAWKEGNIPIDVYAYVAVIR 312
Query: 374 AFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLIIK 478
F +A VL +++Q LI ++ Y+ +I+
Sbjct: 313 GFCNEMKMDRAEVVLGDMEKQELISDARCYSELIR 347
Score = 55.8 bits (133), Expect = 3e-06
Identities = 31/114 (27%), Positives = 59/114 (51%)
Frame = +2
Query: 134 DKVVYNTAIEALCKLGKMEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLF 313
D Y+ I CK G + +A+ L NDM+ + + V +T++ +C G S + F
Sbjct: 338 DARCYSELIRGYCKAGDLSKALALHNDMESKGIKTNCVIVSTILQYFCEKGMHSQVVEEF 397
Query: 314 ERLKDVGVKSDTVTYNVLISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLII 475
+R KD+ + D V+YN+++ A K +A+ +L+ +K + + + Y +I
Sbjct: 398 KRFKDLRIFLDEVSYNIVVDALCKLEKVDQAVALLDEMKGKQMDMDIMHYTTLI 451
>ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Glycine max]
Length = 819
Score = 160 bits (406), Expect = 8e-38
Identities = 74/158 (46%), Positives = 112/158 (70%)
Frame = +2
Query: 5 MTSKGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGK 184
M S+G+KTNCV+++ IL CL + G+ EVV+QF K SG+F D V YN +ALC LGK
Sbjct: 361 MISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCMLGK 420
Query: 185 MEEAVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNV 364
+E+AV+++ +MK + DV HYTTLI+GYCL G L A +F+ +K+ G+K D VTYNV
Sbjct: 421 VEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNV 480
Query: 365 LISAFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLIIK 478
L + +NG A++ + +L++++ QG+ PNS ++ +II+
Sbjct: 481 LAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIE 518
Score = 68.6 bits (166), Expect = 5e-10
Identities = 35/126 (27%), Positives = 62/126 (49%)
Frame = +2
Query: 95 EQFNNFKNSGVFFDKVVYNTAIEALCKLGKMEEAVDLLNDMKRDEVVPDVVHYTTLIHGY 274
E F+ + Y + C K++EA + +DM+R VVPDV Y++LIHGY
Sbjct: 286 EVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGY 345
Query: 275 CLHGRLSDAEKLFERLKDVGVKSDTVTYNVLISAFLKNGLAKKALGVLNYVKEQGLIPNS 454
C L A L + + GVK++ V + ++ + G+ + + +KE G+ +
Sbjct: 346 CKSHNLLRALALHDEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDG 405
Query: 455 DSYNLI 472
+YN++
Sbjct: 406 VAYNIV 411
Score = 68.6 bits (166), Expect = 5e-10
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 48/197 (24%)
Frame = +2
Query: 5 MTSKGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGK 184
M ++ + ++ + IL L Q G F+ F + G D V Y I + C++
Sbjct: 602 MLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRMNC 661
Query: 185 MEEAVDLLNDMKRDEVVPDVVHYTTLIHG---------YCLHGR-----------LSDAE 304
++EA DL DMKR + PDV+ +T L+ G + HG+ L D E
Sbjct: 662 LQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKRFSSHGKRKTTSLYVSTILRDME 721
Query: 305 K----------------------------LFERLKDVGVKSDTVTYNVLISAFLKNGLAK 400
+ LF+++ + G++ DT+TY L+S G +
Sbjct: 722 QMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMIESGLEPDTITYTALVSGLCNRGHVE 781
Query: 401 KALGVLNYVKEQGLIPN 451
KA+ +LN + +G+ P+
Sbjct: 782 KAVTLLNEMSSKGMTPD 798
Score = 68.2 bits (165), Expect = 7e-10
Identities = 39/118 (33%), Positives = 60/118 (50%)
Frame = +2
Query: 50 ILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGKMEEAVDLLNDMKRDE 229
+L L G + V+ + S V K++Y+ + ALC+ G M+ A L +
Sbjct: 582 LLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRG 641
Query: 230 VVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNVLISAFLKNGLAKK 403
PDVV YT +I+ YC L +A LF+ +K G+K D +T+ VL+ LK L K+
Sbjct: 642 FTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYLGKR 699
Score = 59.7 bits (143), Expect = 2e-07
Identities = 35/149 (23%), Positives = 70/149 (46%)
Frame = +2
Query: 29 NCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGKMEEAVDLL 208
N I ++++ + L + E F N G K + LC G +E+AV LL
Sbjct: 540 NIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKASCFKLLSKLCMTGDIEKAVKLL 599
Query: 209 NDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNVLISAFLKN 388
+ M V P + Y+ ++ C G + +A LF+ G D VTY ++I+++ +
Sbjct: 600 DRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFVHRGFTPDVVTYTIMINSYCRM 659
Query: 389 GLAKKALGVLNYVKEQGLIPNSDSYNLII 475
++A + +K +G+ P+ ++ +++
Sbjct: 660 NCLQEAHDLFQDMKRRGIKPDVITFTVLL 688
Score = 57.4 bits (137), Expect = 1e-06
Identities = 34/145 (23%), Positives = 67/145 (46%)
Frame = +2
Query: 17 GIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGKMEEA 196
G NC ++K L +KG + + F + GV + IE LC + +
Sbjct: 225 GFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLG 284
Query: 197 VDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNVLISA 376
++L ++ +V YT ++ G+C +L +A+ +F+ ++ GV D Y+ LI
Sbjct: 285 YEVLQAFRKGNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHG 344
Query: 377 FLKNGLAKKALGVLNYVKEQGLIPN 451
+ K+ +AL + + + +G+ N
Sbjct: 345 YCKSHNLLRALALHDEMISRGVKTN 369
Score = 56.6 bits (135), Expect = 2e-06
Identities = 34/123 (27%), Positives = 60/123 (48%)
Frame = +2
Query: 86 EVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGKMEEAVDLLNDMKRDEVVPDVVHYTTLI 265
E + Q N + +F +N ++ L ++A+D L +R ++PDV+ L
Sbjct: 143 ETLFQDFNTSHKNNYFLLRAFNGFVKTCVSLNMFDKAIDFLFQTRRRGILPDVLTCNFLF 202
Query: 266 HGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNVLISAFLKNGLAKKALGVLNYVKEQGLI 445
+ HG + A ++E+LK G + TY ++I A K G K+ L V ++ G+I
Sbjct: 203 NRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQPLCVFEEMERVGVI 262
Query: 446 PNS 454
P+S
Sbjct: 263 PHS 265
Score = 55.5 bits (132), Expect = 5e-06
Identities = 32/154 (20%), Positives = 68/154 (44%)
Frame = +2
Query: 14 KGIKTNCVIINSILKCLFQKGLPSEVVEQFNNFKNSGVFFDKVVYNTAIEALCKLGKMEE 193
+GI + + N + L + G + + + K G + Y I+ALCK G +++
Sbjct: 189 RGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQ 248
Query: 194 AVDLLNDMKRDEVVPDVVHYTTLIHGYCLHGRLSDAEKLFERLKDVGVKSDTVTYNVLIS 373
+ + +M+R V+P + I G C + R ++ + + + Y ++
Sbjct: 249 PLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVVR 308
Query: 374 AFLKNGLAKKALGVLNYVKEQGLIPNSDSYNLII 475
F +A GV + ++ QG++P+ Y+ +I
Sbjct: 309 GFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLI 342