BLASTX nr result

ID: Lithospermum22_contig00037091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037091
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25132.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_002271957.1| PREDICTED: ribosomal RNA small subunit methy...    73   3e-11
ref|XP_003555302.1| PREDICTED: ribosomal RNA small subunit methy...    72   5e-11
ref|XP_002466524.1| hypothetical protein SORBIDRAFT_01g009310 [S...    71   8e-11
ref|XP_004136932.1| PREDICTED: ribosomal RNA small subunit methy...    71   1e-10

>emb|CBI25132.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = +3

Query: 99  RGGLPRFFAQTLPSAKGDVVRVEGDEFWHITKVMRLNVNDR 221
           RGGLPRFF++ LP +KG +VRV+GDEFWH+TKV+RL+VNDR
Sbjct: 162 RGGLPRFFSEVLPPSKGGIVRVQGDEFWHMTKVLRLSVNDR 202


>ref|XP_002271957.1| PREDICTED: ribosomal RNA small subunit methyltransferase E-like
           [Vitis vinifera]
          Length = 287

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = +3

Query: 99  RGGLPRFFAQTLPSAKGDVVRVEGDEFWHITKVMRLNVNDR 221
           RGGLPRFF++ LP +KG +VRV+GDEFWH+TKV+RL+VNDR
Sbjct: 39  RGGLPRFFSEVLPPSKGGIVRVQGDEFWHMTKVLRLSVNDR 79


>ref|XP_003555302.1| PREDICTED: ribosomal RNA small subunit methyltransferase E-like
           [Glycine max]
          Length = 281

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 29/41 (70%), Positives = 37/41 (90%)
 Frame = +3

Query: 99  RGGLPRFFAQTLPSAKGDVVRVEGDEFWHITKVMRLNVNDR 221
           RGGLPRF+++TLP +KG V+RV+GDEFWH+TKV+RL  NDR
Sbjct: 15  RGGLPRFYSETLPPSKGSVIRVQGDEFWHMTKVLRLTTNDR 55


>ref|XP_002466524.1| hypothetical protein SORBIDRAFT_01g009310 [Sorghum bicolor]
           gi|241920378|gb|EER93522.1| hypothetical protein
           SORBIDRAFT_01g009310 [Sorghum bicolor]
          Length = 287

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 28/41 (68%), Positives = 38/41 (92%)
 Frame = +3

Query: 99  RGGLPRFFAQTLPSAKGDVVRVEGDEFWHITKVMRLNVNDR 221
           RGGLPRF A +LPS+KG+V+R++GDEFWH+T+V+RL +NDR
Sbjct: 42  RGGLPRFHAPSLPSSKGEVIRIQGDEFWHMTRVLRLGINDR 82


>ref|XP_004136932.1| PREDICTED: ribosomal RNA small subunit methyltransferase E-like
           [Cucumis sativus] gi|449495704|ref|XP_004159920.1|
           PREDICTED: ribosomal RNA small subunit methyltransferase
           E-like [Cucumis sativus]
          Length = 287

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/41 (73%), Positives = 36/41 (87%)
 Frame = +3

Query: 99  RGGLPRFFAQTLPSAKGDVVRVEGDEFWHITKVMRLNVNDR 221
           RGGLPRFF+Q LPS KGDV+R+EGDE WH+TKV+RL  +DR
Sbjct: 40  RGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDR 80


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