BLASTX nr result

ID: Lithospermum22_contig00037039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037039
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521839.1| brg-1 associated factor, putative [Ricinus c...    68   7e-10
emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]    67   1e-09
ref|XP_004170902.1| PREDICTED: uncharacterized protein LOC101226...    65   4e-09
ref|XP_004148436.1| PREDICTED: upstream activation factor subuni...    65   4e-09
ref|XP_002522329.1| Upstream activation factor subunit UAF30, pu...    65   4e-09

>ref|XP_002521839.1| brg-1 associated factor, putative [Ricinus communis]
           gi|223538877|gb|EEF40475.1| brg-1 associated factor,
           putative [Ricinus communis]
          Length = 614

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/40 (77%), Positives = 35/40 (87%)
 Frame = -3

Query: 407 DPSDKRRILCDEKLQELFNVDQFNGFSMAKLLKDHFIKKE 288
           DPSDKRRILCD+KL+ELF VD FNGFS++KLL  HFIK E
Sbjct: 574 DPSDKRRILCDDKLKELFEVDSFNGFSVSKLLTAHFIKME 613


>emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]
          Length = 332

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = -3

Query: 407 DPSDKRRILCDEKLQELFNVDQFNGFSMAKLLKDHFIKKE 288
           DPSDKRRI+CDEKL+ELF+VD FNGF++ KLL  HFIK E
Sbjct: 292 DPSDKRRIICDEKLKELFDVDSFNGFTVPKLLSAHFIKTE 331


>ref|XP_004170902.1| PREDICTED: uncharacterized protein LOC101226406, partial [Cucumis
           sativus]
          Length = 225

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/38 (73%), Positives = 35/38 (92%)
 Frame = -3

Query: 407 DPSDKRRILCDEKLQELFNVDQFNGFSMAKLLKDHFIK 294
           DPSDKRRI+CDE+L+ELF+VD FNGF+++KLL  HFIK
Sbjct: 185 DPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIK 222


>ref|XP_004148436.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
           sativus]
          Length = 332

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/38 (73%), Positives = 35/38 (92%)
 Frame = -3

Query: 407 DPSDKRRILCDEKLQELFNVDQFNGFSMAKLLKDHFIK 294
           DPSDKRRI+CDE+L+ELF+VD FNGF+++KLL  HFIK
Sbjct: 292 DPSDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIK 329


>ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
           communis] gi|223538407|gb|EEF40013.1| Upstream
           activation factor subunit UAF30, putative [Ricinus
           communis]
          Length = 322

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = -3

Query: 407 DPSDKRRILCDEKLQELFNVDQFNGFSMAKLLKDHFIK 294
           DPSDKRRI+CDEKL+ELF+VD FNGF++ KLL  HF+K
Sbjct: 284 DPSDKRRIICDEKLKELFDVDTFNGFTVTKLLSAHFVK 321


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