BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00037030
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japo...    82   3e-22
gb|ABA97563.1| retrotransposon protein, putative, unclassified [...    87   7e-22
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...    84   1e-21
gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...    79   2e-21
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo...    87   2e-21

>gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japonica Group]
          Length = 1049

 Score = 82.0 bits (201), Expect(2) = 3e-22
 Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
 Frame = +1

Query: 22  FMKGNRLPQDITSTVVCLIPKKKGAKSWKEYRPISLCTFLNKIVTKLLNNRIGLMLPKLI 201
           F+ G+ +P+ +  +++ LIPK        ++RPISLC  L KI +K+L NR+ + LP ++
Sbjct: 214 FLTGDEIPEGLCDSIIVLIPKIHNLVHLSKFRPISLCNVLYKIASKVLANRLKIFLPDIV 273

Query: 202 SDF*PGFVKGRVIQDNILLAQELVHCIDKTKPRGN-VVLKLDMTKAF 339
           S+F   FV GR+I D+ L+A E +H I +   +     LK+DM KA+
Sbjct: 274 SEFQSAFVPGRLITDSALVAFECLHSIRRQHSKNPFFALKIDMMKAY 320



 Score = 48.1 bits (113), Expect(2) = 3e-22
 Identities = 15/32 (46%), Positives = 26/32 (81%)
 Frame = +2

Query: 332 KPFDKVSWSFLKSVLTKFGFSPAWITMIMQCI 427
           K +D++ WS+L+  LTK GF+PAW++ +M+C+
Sbjct: 318 KAYDRIEWSYLQGCLTKLGFAPAWVSSVMRCV 349


>gb|ABA97563.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 839

 Score = 86.7 bits (213), Expect(2) = 7e-22
 Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
 Frame = +1

Query: 25  MKGNRLPQDITSTVVCLIPKKKGAKSWKEYRPISLCTFLNKIVTKLLNNRIGLMLPKLIS 204
           + G ++PQ+   T + LIPK K  +  K+ RPIS+C  L KIV+K+L NR+  +LP++IS
Sbjct: 353 LNGGQIPQEWNETTIVLIPKVKTFELIKDLRPISVCNVLYKIVSKVLANRLKKILPEVIS 412

Query: 205 DF*PGFVKGRVIQDNILLAQELVHCIDKTK--PRGNVVLKLDMTKAF 339
                F  GR+I DNIL+A EL H + + +    G   LKLDM+KA+
Sbjct: 413 QSQSAFFPGRLISDNILVAYELTHYMRQKRNGETGYAALKLDMSKAY 459



 Score = 42.0 bits (97), Expect(2) = 7e-22
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +2

Query: 332 KPFDKVSWSFLKSVLTKFGFSPAWITMIMQCI 427
           K +D+V W FLK ++ K GF+  W  +IM+CI
Sbjct: 457 KAYDRVEWGFLKDMMLKLGFNQEWTQLIMKCI 488


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score = 84.3 bits (207), Expect(2) = 1e-21
 Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
 Frame = +1

Query: 22  FMKGNRLPQDITSTVVCLIPKKKGAKSWKEYRPISLCTFLNKIVTKLLNNRIGLMLPKLI 201
           F      P+ +  T + LIPK  G +   +YRPI+LC    KIV K++  R+ L+LPKLI
Sbjct: 369 FFTSKNFPRRMNETHIRLIPKDLGPRKVADYRPIALCNIFYKIVAKIMTKRMQLILPKLI 428

Query: 202 SDF*PGFVKGRVIQDNILLAQELVHCI--DKTKPRGNVVLKLDMTKAF 339
           S+    FV GRVI DN+L+  E++H +     K   ++ +K DM+KA+
Sbjct: 429 SENQSAFVPGRVISDNVLITHEVLHFLRTSSAKKHCSMAVKTDMSKAY 476



 Score = 43.5 bits (101), Expect(2) = 1e-21
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +2

Query: 332 KPFDKVSWSFLKSVLTKFGFSPAWITMIMQCI 427
           K +D+V W FLK VL +FGF   WI  +++C+
Sbjct: 474 KAYDRVEWDFLKKVLQRFGFHSIWIDWVLECV 505


>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score = 78.6 bits (192), Expect(2) = 2e-21
 Identities = 44/115 (38%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   VYQVACHFMKGNRLPQDITSTVVCLIPKKKGAKSWKEYRPISLCTFLNKIVTKLLNNRIG 180
           ++ VA  ++     P ++ +T + L PK    +  K+ RPISLC  L KI++K+L NR+ 
Sbjct: 27  IFFVASSWLTSGSFPPELNATHIVLAPKGDNPEYMKDLRPISLCNVLYKIISKVLANRLR 86

Query: 181 LMLPKLISDF*PGFVKGRVIQDNILLAQELVHCID-KTKPR-GNVVLKLDMTKAF 339
            ++ K IS     FV  R I DN + A E++HC+  K K + G++ LKLD++KAF
Sbjct: 87  PLIDKWISTEQAAFVPSRSIMDNAITAFEVLHCMKCKRKGKTGDIALKLDISKAF 141



 Score = 48.9 bits (115), Expect(2) = 2e-21
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = +2

Query: 332 KPFDKVSWSFLKSVLTKFGFSPAWITMIMQCI 427
           K FD VSWS+L+++L K GFSP WI+ +M CI
Sbjct: 139 KAFDSVSWSYLQAILCKLGFSPQWISWMMMCI 170


>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
          Length = 662

 Score = 86.7 bits (213), Expect(2) = 2e-21
 Identities = 47/108 (43%), Positives = 72/108 (66%), Gaps = 3/108 (2%)
 Frame = +1

Query: 25  MKGNRLPQDITSTVVCLIPKKKGAKSWKEYRPISLCTFLNKIVTKLLNNRIGLMLPKLIS 204
           ++G  +P +   T++ LIPK    ++ K+ RPISLC  L KIV+K+L NR+  +LP++IS
Sbjct: 169 LRGAPMPPEWNETIIVLIPKVPKPENIKDLRPISLCNVLYKIVSKVLANRLKTILPEVIS 228

Query: 205 DF*PGFVKGRVIQDNILLAQELVHCIDKTKPRGNV---VLKLDMTKAF 339
                FV GR+I DNIL+A E+ H + ++K RG +    +KLDM+KA+
Sbjct: 229 PTQSAFVPGRLISDNILVAYEMTHYM-RSKKRGKMGYAAIKLDMSKAY 275



 Score = 40.4 bits (93), Expect(2) = 2e-21
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +2

Query: 332 KPFDKVSWSFLKSVLTKFGFSPAWITMIMQCI 427
           K +D+V WSFL+ ++   GF+  WI ++M C+
Sbjct: 273 KAYDRVEWSFLRDMMLWLGFNAEWINLVMHCV 304