BLASTX nr result
ID: Lithospermum22_contig00037028
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00037028 (498 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514929.1| GTP binding protein, putative [Ricinus commu... 98 8e-19 ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPa... 75 4e-12 ref|XP_003538555.1| PREDICTED: putative ribosome biogenesis GTPa... 72 6e-11 ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPa... 69 3e-10 gb|AFK47688.1| unknown [Medicago truncatula] 68 9e-10 >ref|XP_002514929.1| GTP binding protein, putative [Ricinus communis] gi|223545980|gb|EEF47483.1| GTP binding protein, putative [Ricinus communis] Length = 500 Score = 97.8 bits (242), Expect = 8e-19 Identities = 60/123 (48%), Positives = 75/123 (60%), Gaps = 11/123 (8%) Frame = -2 Query: 377 MPITSISLLRFKPPPPFSSTFRCCFFTISAASSRQNPSTSSRKLPHQQQQ---------- 228 MPI SISL R++ P F TIS R P T S++ QQQQ Sbjct: 1 MPIASISLFRYRTPTTFHHHHLLRHITIS----RHLPITVSKQQQQQQQQKNPNNISRKP 56 Query: 227 -QPSKNLLKARDTVKKHLSSLAPILSPDEKVKLASNQAVGLVSASQANFMRVVIQSPPQA 51 QP+K +LKAR T+ K SSL+PILSPD K L+ +QAVG V+A+QANFMRV+IQS P + Sbjct: 57 QQPNKYILKARQTLVKEYSSLSPILSPDTKPNLSDSQAVGTVAAAQANFMRVIIQSLPPS 116 Query: 50 NGT 42 +GT Sbjct: 117 SGT 119 >ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Cucumis sativus] gi|449489232|ref|XP_004158254.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Cucumis sativus] Length = 504 Score = 75.5 bits (184), Expect = 4e-12 Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Frame = -2 Query: 377 MPITSISLLRFKPP--------PPFSSTFRCCFF--TISAASSRQNPSTSSRKLPHQQQQ 228 M I SIS+LR P F + R F S + + NP+ S K P Sbjct: 1 MAIASISMLRHHTAAIAATSSIPVFGNVLRRVFNFRCFSIVAKQHNPNNVSNKPP----- 55 Query: 227 QPSKNLLKARDTVKKHLSSLAPILSPDEKVKLASNQAVGLVSASQANFMRVVIQSPPQAN 48 PSKNLL+A+ T K + SSLAP+LSP + L+ +QA+G V+A+QANFMRV++Q+ P Sbjct: 56 -PSKNLLRAKHTFKDY-SSLAPVLSPQDNPPLSESQAIGTVAAAQANFMRVIVQTLP--- 110 Query: 47 GTQFDEFVDLEASRS 3 +QF + + + RS Sbjct: 111 -SQFSQSPNDDLERS 124 >ref|XP_003538555.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine max] Length = 475 Score = 71.6 bits (174), Expect = 6e-11 Identities = 44/114 (38%), Positives = 71/114 (62%), Gaps = 5/114 (4%) Frame = -2 Query: 368 TSISLLRFKPPPPFSST-----FRCCFFTISAASSRQNPSTSSRKLPHQQQQQPSKNLLK 204 +S S+LR + ++ T FRC TI+A +Q + P++Q PS+NLLK Sbjct: 5 SSFSMLRHRAVAAYAPTLLLRRFRC-LPTIAARHQQQQQN------PNKQAAAPSRNLLK 57 Query: 203 ARDTVKKHLSSLAPILSPDEKVKLASNQAVGLVSASQANFMRVVIQSPPQANGT 42 A+ T+K++ S LAP+LS ++ L +QA+G+V+ASQANFMRV++ + +G+ Sbjct: 58 AKQTLKEY-SCLAPVLSLEDSPPLTESQAIGVVAASQANFMRVIVPENDEPSGS 110 >ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine max] Length = 473 Score = 69.3 bits (168), Expect = 3e-10 Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 5/114 (4%) Frame = -2 Query: 368 TSISLLRFKP-----PPPFSSTFRCCFFTISAASSRQNPSTSSRKLPHQQQQQPSKNLLK 204 +S S+LR + P FRC I+A +QNP+ +Q PS+NLLK Sbjct: 5 SSFSMLRHRAAASAAPLLLLRRFRC--LRIAARHQQQNPN---------KQAPPSRNLLK 53 Query: 203 ARDTVKKHLSSLAPILSPDEKVKLASNQAVGLVSASQANFMRVVIQSPPQANGT 42 A+ T+K+ SSLAP+LS + L +QA+G+V+ASQANFMRV++ + +G+ Sbjct: 54 AKQTLKE-FSSLAPVLSLEASPPLTESQAIGVVAASQANFMRVIVPENDEPSGS 106 >gb|AFK47688.1| unknown [Medicago truncatula] Length = 217 Score = 67.8 bits (164), Expect = 9e-10 Identities = 46/107 (42%), Positives = 65/107 (60%) Frame = -2 Query: 377 MPITSISLLRFKPPPPFSSTFRCCFFTISAASSRQNPSTSSRKLPHQQQQQPSKNLLKAR 198 M + S S++R + ++ F ISA + QNP + + PSKNLLKA+ Sbjct: 1 MSLASFSIIRHQRTVATAAPRLLHHFQISARN--QNP----------KHEAPSKNLLKAK 48 Query: 197 DTVKKHLSSLAPILSPDEKVKLASNQAVGLVSASQANFMRVVIQSPP 57 T+K SSLA ILS +E L+ +QAVG+V++SQANFMRV++QS P Sbjct: 49 RTLKD-FSSLALILSREETPPLSESQAVGVVASSQANFMRVIVQSQP 94