BLASTX nr result

ID: Lithospermum22_contig00036974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036974
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    62   6e-08
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    52   9e-08
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    49   1e-06
dbj|BAB10772.1| unnamed protein product [Arabidopsis thaliana]         57   1e-06
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    57   2e-06

>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/66 (45%), Positives = 44/66 (66%)
 Frame = +2

Query: 35   VKELLQWYEEASGWSVNFSKSSMCFSPNVEDGLRAELCAVLGVVEVQGHQKYLGLPWAGI 214
            +K +L+ YE +SG S+NF KS + +S NV+D ++A +  +LGV +V G  KYLG+P    
Sbjct: 1123 MKNILEMYESSSGQSINFQKSEVFYSRNVDDAVKASISQILGVQQVMGTGKYLGVPSMVG 1182

Query: 215  RLRSST 232
            R R ST
Sbjct: 1183 RSRIST 1188


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 52.4 bits (124), Expect(2) = 9e-08
 Identities = 25/67 (37%), Positives = 40/67 (59%)
 Frame = +2

Query: 2   FGQATLEGYNAVKELLQWYEEASGWSVNFSKSSMCFSPNVEDGLRAELCAVLGVVEVQGH 181
           F +A+ +    + E+L  YE+ASG  +N+ KS + FS  V    + EL  +L + +V+ H
Sbjct: 692 FTRASRQECAIIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERH 751

Query: 182 QKYLGLP 202
            KYLG+P
Sbjct: 752 MKYLGIP 758



 Score = 28.5 bits (62), Expect(2) = 9e-08
 Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +1

Query: 184 KVLGVA--VGRNKTEVFYSIRERMRGRVEGWSSK 279
           K LG+    GR++T +F S+ +R+  +++GW  K
Sbjct: 753 KYLGIPSITGRSRTAIFDSLMDRIWKKLQGWKEK 786


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 25/67 (37%), Positives = 39/67 (58%)
 Frame = +2

Query: 2    FGQATLEGYNAVKELLQWYEEASGWSVNFSKSSMCFSPNVEDGLRAELCAVLGVVEVQGH 181
            F +A+ +    +  + + YEEASG  +N++KSS+ F   +    R  L  +LG+  V+G 
Sbjct: 1050 FCRASNQNIEQLALIFKKYEEASGQKINYAKSSIIFGQKIPTMRRQRLHRLLGIDNVRGG 1109

Query: 182  QKYLGLP 202
             KYLGLP
Sbjct: 1110 GKYLGLP 1116



 Score = 28.9 bits (63), Expect(2) = 1e-06
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +1

Query: 175  GASKVLGVA--VGRNKTEVFYSIRERMRGRVEGWS 273
            G  K LG+   +GR K E+F  I  +++ R EGW+
Sbjct: 1108 GGGKYLGLPEQLGRRKVELFEYIVTKVKERTEGWA 1142


>dbj|BAB10772.1| unnamed protein product [Arabidopsis thaliana]
          Length = 171

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/67 (41%), Positives = 42/67 (62%)
 Frame = +2

Query: 2   FGQATLEGYNAVKELLQWYEEASGWSVNFSKSSMCFSPNVEDGLRAELCAVLGVVEVQGH 181
           F +A+ +    + E+L+ YE  SG  +NF+KSS+ F   V+D L+AE+ A LG+  + G 
Sbjct: 22  FCKASKKQCGVILEILKHYETVSGQQINFTKSSIQFGHKVDDSLKAEIKATLGITNLGGM 81

Query: 182 QKYLGLP 202
             YLGLP
Sbjct: 82  GSYLGLP 88


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/67 (41%), Positives = 41/67 (61%)
 Frame = +2

Query: 2   FGQATLEGYNAVKELLQWYEEASGWSVNFSKSSMCFSPNVEDGLRAELCAVLGVVEVQGH 181
           F +A  E    + E+L+ YE  SG  +NFSKSS+ F   VED ++A++  +LG+  + G 
Sbjct: 472 FCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLILGIHNLGGM 531

Query: 182 QKYLGLP 202
             YLGLP
Sbjct: 532 GSYLGLP 538


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