BLASTX nr result

ID: Lithospermum22_contig00036971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036971
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD30882.1| putative RF2 protein [Ehretia acuminata] gi|34080...   137   1e-30
gb|ADD30879.1| putative RF2 protein [Antirrhinum majus] gi|34080...   136   2e-30
ref|YP_087009.1| Ycf2 [Panax ginseng] gi|52220874|ref|YP_087028....   135   3e-30
gb|AEK71447.1| hypothetical chloroplast RF2 [Celtis occidentalis]     135   4e-30
ref|YP_007317292.1| Ycf2 (chloroplast) [Camellia sinensis] gi|43...   134   6e-30

>gb|ADD30882.1| putative RF2 protein [Ehretia acuminata]
           gi|340806978|gb|AEK71601.1| hypothetical chloroplast RF2
           [Ehretia acuminata]
          Length = 2284

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/73 (89%), Positives = 68/73 (93%)
 Frame = +1

Query: 235 YTPIRNLIQIQYSTYGYIRNVLNRFFLMNRSDHDFEYGIQRDQIGKDTPNRRTLMKYTIN 414
           Y  IRNLIQIQYSTYGYIRNVLNRFFLMNRSD +FEYGIQRDQIGKDT N RT+MKYTIN
Sbjct: 719 YRLIRNLIQIQYSTYGYIRNVLNRFFLMNRSDRNFEYGIQRDQIGKDTLNHRTIMKYTIN 778

Query: 415 QHFSNLKKSRKKW 453
           QHFSNLKKS+KKW
Sbjct: 779 QHFSNLKKSQKKW 791


>gb|ADD30879.1| putative RF2 protein [Antirrhinum majus]
           gi|340807055|gb|AEK71663.1| hypothetical chloroplast RF2
           [Antirrhinum majus]
          Length = 2274

 Score =  136 bits (343), Expect = 2e-30
 Identities = 65/73 (89%), Positives = 67/73 (91%)
 Frame = +1

Query: 235 YTPIRNLIQIQYSTYGYIRNVLNRFFLMNRSDHDFEYGIQRDQIGKDTPNRRTLMKYTIN 414
           Y  IRNLIQIQYSTYGYIRNVLNRFFLMNRSDH+FEYGIQRDQIGKDT N RTLMKYTIN
Sbjct: 716 YRLIRNLIQIQYSTYGYIRNVLNRFFLMNRSDHNFEYGIQRDQIGKDTLNHRTLMKYTIN 775

Query: 415 QHFSNLKKSRKKW 453
           QH SNLKKS+ KW
Sbjct: 776 QHLSNLKKSQNKW 788


>ref|YP_087009.1| Ycf2 [Panax ginseng] gi|52220874|ref|YP_087028.1| Ycf2 [Panax
           ginseng] gi|68053092|sp|Q68RU4.1|YCF2_PANGI RecName:
           Full=Protein ycf2 gi|51235356|gb|AAT98552.1| ycf2
           protein [Panax ginseng] gi|51235377|gb|AAT98573.1| ycf2
           protein [Panax ginseng]
          Length = 2110

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/73 (87%), Positives = 68/73 (93%)
 Frame = +1

Query: 235 YTPIRNLIQIQYSTYGYIRNVLNRFFLMNRSDHDFEYGIQRDQIGKDTPNRRTLMKYTIN 414
           Y  IRNLIQIQYSTYGYIRNVLNRFFLMNRSD +FEYGIQRDQIGKDT N RT+MKYTIN
Sbjct: 520 YRLIRNLIQIQYSTYGYIRNVLNRFFLMNRSDRNFEYGIQRDQIGKDTLNHRTIMKYTIN 579

Query: 415 QHFSNLKKSRKKW 453
           QHFSNLKKS+K+W
Sbjct: 580 QHFSNLKKSQKRW 592


>gb|AEK71447.1| hypothetical chloroplast RF2 [Celtis occidentalis]
          Length = 2008

 Score =  135 bits (339), Expect = 4e-30
 Identities = 64/73 (87%), Positives = 67/73 (91%)
 Frame = +1

Query: 235 YTPIRNLIQIQYSTYGYIRNVLNRFFLMNRSDHDFEYGIQRDQIGKDTPNRRTLMKYTIN 414
           Y  IRNLIQIQYSTYGYIRNVLNRFFLMNRSD +FEYGIQRDQIG DT N RT+MKYTIN
Sbjct: 712 YRLIRNLIQIQYSTYGYIRNVLNRFFLMNRSDRNFEYGIQRDQIGNDTLNHRTIMKYTIN 771

Query: 415 QHFSNLKKSRKKW 453
           QHFSNLKKS+KKW
Sbjct: 772 QHFSNLKKSQKKW 784


>ref|YP_007317292.1| Ycf2 (chloroplast) [Camellia sinensis]
           gi|435856436|ref|YP_007317311.1| Ycf2 (chloroplast)
           [Camellia sinensis] gi|430728316|gb|AGA55640.1| Ycf2
           (chloroplast) [Camellia sinensis]
           gi|430728335|gb|AGA55659.1| Ycf2 (chloroplast) [Camellia
           sinensis]
          Length = 2298

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/73 (87%), Positives = 67/73 (91%)
 Frame = +1

Query: 235 YTPIRNLIQIQYSTYGYIRNVLNRFFLMNRSDHDFEYGIQRDQIGKDTPNRRTLMKYTIN 414
           Y  IRNLIQIQYSTYGYIRNVLNRFFLMNRSD +FEYGIQRDQIGKDT N RT+MKYTIN
Sbjct: 719 YRLIRNLIQIQYSTYGYIRNVLNRFFLMNRSDRNFEYGIQRDQIGKDTLNHRTIMKYTIN 778

Query: 415 QHFSNLKKSRKKW 453
           QH SNLKKS+KKW
Sbjct: 779 QHLSNLKKSQKKW 791


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