BLASTX nr result

ID: Lithospermum22_contig00036839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036839
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor ...   107   1e-21
ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CU...   104   9e-21
ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   103   1e-20
emb|CBI20820.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm...   102   3e-20

>ref|XP_004136459.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Cucumis
           sativus]
          Length = 1915

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/71 (70%), Positives = 61/71 (85%)
 Frame = -1

Query: 215 LIAKANSLMDKITSSVDNPNPIVLHALASILETQESRYKEENTSSLNNGRSTHNIGRLGN 36
           LIA+A+ LMDK+T+S DNPNP  LHALA++LETQESRY  EN  S +NGR +H+IGRLGN
Sbjct: 51  LIARAHKLMDKVTASYDNPNPTFLHALATLLETQESRYMAENGHSSSNGRGSHSIGRLGN 110

Query: 35  LIRENDEFFEL 3
           ++RENDEFFEL
Sbjct: 111 VLRENDEFFEL 121


>ref|XP_004162499.1| PREDICTED: LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor
           homolog 1-like [Cucumis sativus]
          Length = 1900

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/71 (69%), Positives = 60/71 (84%)
 Frame = -1

Query: 215 LIAKANSLMDKITSSVDNPNPIVLHALASILETQESRYKEENTSSLNNGRSTHNIGRLGN 36
           LIA+A+ LMDK+T+S DNPNP  LHALA++LETQESRY  EN  S +NGR +H+IGRLGN
Sbjct: 56  LIARAHKLMDKVTASYDNPNPTFLHALATLLETQESRYMAENGHSSSNGRGSHSIGRLGN 115

Query: 35  LIRENDEFFEL 3
           ++RENDE FEL
Sbjct: 116 VLRENDEXFEL 126


>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
           vinifera]
          Length = 2024

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/72 (73%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = -1

Query: 215 LIAKANSLMDKITSSVDNPNPIVLHALASILETQESRYKEE-NTSSLNNGRSTHNIGRLG 39
           L +K   LM+KITSS DNPNP VLHAL+SILETQESRY EE   SSLNNGR+TH IGRLG
Sbjct: 171 LQSKVQKLMEKITSSPDNPNPSVLHALSSILETQESRYMEETGHSSLNNGRATHIIGRLG 230

Query: 38  NLIRENDEFFEL 3
           +L+R+ND+FFEL
Sbjct: 231 SLVRDNDDFFEL 242


>emb|CBI20820.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/72 (73%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
 Frame = -1

Query: 215 LIAKANSLMDKITSSVDNPNPIVLHALASILETQESRYKEE-NTSSLNNGRSTHNIGRLG 39
           L +K   LM+KITSS DNPNP VLHAL+SILETQESRY EE   SSLNNGR+TH IGRLG
Sbjct: 37  LQSKVQKLMEKITSSPDNPNPSVLHALSSILETQESRYMEETGHSSLNNGRATHIIGRLG 96

Query: 38  NLIRENDEFFEL 3
           +L+R+ND+FFEL
Sbjct: 97  SLVRDNDDFFEL 108


>ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis]
           gi|223532632|gb|EEF34418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1871

 Score =  102 bits (255), Expect = 3e-20
 Identities = 51/72 (70%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
 Frame = -1

Query: 215 LIAKANSLMDKITSSVDNPNPIVLHALASILETQESRYKEEN-TSSLNNGRSTHNIGRLG 39
           L+ KA  LMD+ITSS DNPNP VLHAL+S+LE QES Y E+N  SS NN R++HNIGRLG
Sbjct: 48  LMDKAQKLMDRITSSPDNPNPTVLHALSSLLEAQESLYMEKNGYSSFNNSRASHNIGRLG 107

Query: 38  NLIRENDEFFEL 3
           NL+RENDEFF+L
Sbjct: 108 NLVRENDEFFDL 119


Top