BLASTX nr result

ID: Lithospermum22_contig00036836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036836
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514549.1| hypothetical protein RCOM_1465130 [Ricinus c...    89   1e-15
ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein...    75   1e-11
dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]                 75   1e-11
ref|XP_003613781.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    75   2e-11
ref|XP_003588839.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    74   3e-11

>ref|XP_002514549.1| hypothetical protein RCOM_1465130 [Ricinus communis]
           gi|223546153|gb|EEF47655.1| hypothetical protein
           RCOM_1465130 [Ricinus communis]
          Length = 272

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 51/162 (31%), Positives = 96/162 (59%), Gaps = 4/162 (2%)
 Frame = -2

Query: 746 RQQAILKILGGFPDLKFLYLDSHCVKSLAAGDLHTRL--PTSMLQLIDLLDICLEDVDQF 573
           R+  +L++ G  P +++L++D + +  LAAGD+  R   P ++L+ + L +I L++V +F
Sbjct: 92  RKINMLEVFGCLPSIEYLHVDYYLLMILAAGDIPERFLTPFNLLKTLILREISLDEVAEF 151

Query: 572 SSVLCLIRSSPDLKKFKVFHTRRIAXXXXXXXXXXXXEDYSDVTLNHLEEVEILGVVGGR 393
           S  LCLI+SSP L+K ++                   ++ SD++L+ ++EVE+L + G  
Sbjct: 152 SLALCLIKSSPHLQKLEISVDECPNINSDGAVEFLAVQNRSDISLDKVQEVEMLDLTGRG 211

Query: 392 LELKLIRILFAKSPSLRKMSIR--LSSNTSRKLQILKEIVMF 273
           L++  +++L AKSP L +M +      +T+ +L++L EI  F
Sbjct: 212 LQMGFVKLLLAKSPMLERMHVHPLQGISTNEELRLLTEITRF 253


>ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein [Arabidopsis
           thaliana] gi|75263255|sp|Q9FZ70.1|FDL1_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At1g13570
           gi|9802755|gb|AAF99824.1|AC027134_6 Unknown protein
           [Arabidopsis thaliana] gi|111074352|gb|ABH04549.1|
           At1g13570 [Arabidopsis thaliana]
           gi|332190914|gb|AEE29035.1| F-box/FBD/LRR-repeat protein
           containing protein [Arabidopsis thaliana]
          Length = 416

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
 Frame = -2

Query: 734 ILKILGGFPDLKFLYLDSHCVKSLAAGDLHTRLPTSMLQL--IDLLDICLEDVDQFSSVL 561
           ++K LGG P L+ L    +  K L+ GD   RLP + + L  I+L  +C ED D+   +L
Sbjct: 246 LVKFLGGVPLLEKLVGYIYFTKYLSIGDDPGRLPLTYIHLKTIELYQVCFEDADEVLVLL 305

Query: 560 CLIRSSPDLKKFKVFHTRRIAXXXXXXXXXXXXEDYSDVTLNHLEEVEILGVVGGRLELK 381
            L+  SP+LK+ KV  +                 DY D  L  LE V+I    G R EL+
Sbjct: 306 RLVTHSPNLKELKVSASPVQPFPLEEEGFDLFERDYFDYKLPSLESVKITDASGIRYELE 365

Query: 380 LIRILFAKSPSLRKMSIRLS-SNTSRKLQILKEIVMFRRAAPNVDV 246
            IR L   SP L  +++  S S+   K+ ++ E++ + R +P   +
Sbjct: 366 FIRFLLGTSPVLETVTVSSSLSDKDAKMDMVIELLRYPRVSPRAQL 411


>dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]
          Length = 416

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
 Frame = -2

Query: 734 ILKILGGFPDLKFLYLDSHCVKSLAAGDLHTRLPTSMLQL--IDLLDICLEDVDQFSSVL 561
           ++K LGG P L+ L    +  K L+ GD   RLP + + L  I+L  +C ED D+   +L
Sbjct: 246 LVKFLGGVPLLEKLVGYIYFTKYLSIGDDPGRLPLTYIHLKTIELYQVCFEDADEVLVLL 305

Query: 560 CLIRSSPDLKKFKVFHTRRIAXXXXXXXXXXXXEDYSDVTLNHLEEVEILGVVGGRLELK 381
            L+  SP+LK+ KV  +                 DY D  L  LE V+I    G R EL+
Sbjct: 306 RLVTHSPNLKELKVSASPVQPFPLEEEGFDLFERDYFDYKLPSLESVKITDASGIRYELE 365

Query: 380 LIRILFAKSPSLRKMSIRLS-SNTSRKLQILKEIVMFRRAAPNVDV 246
            IR L   SP L  +++  S S+   K+ ++ E++ + R +P   +
Sbjct: 366 FIRFLLGTSPVLETVTVSSSLSDKDAKMDMVIELLRYPRVSPRAQL 411


>ref|XP_003613781.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355515116|gb|AES96739.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 422

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 49/157 (31%), Positives = 85/157 (54%), Gaps = 2/157 (1%)
 Frame = -2

Query: 710 PDLKFLYLDSHCVKSLAAGDLHTRLPTSMLQLID-LLDICLEDVDQFSSVLCLIRSSPDL 534
           P +K L +  HC+K LAAG +   LPT ++ L   LL+I   D+ + S V CL++SSP+L
Sbjct: 260 PHIKSLLIVEHCLKYLAAGIVPVELPTPIIDLSSLLLEINFNDLREISVVPCLLKSSPNL 319

Query: 533 KKFKVFHTRRIAXXXXXXXXXXXXEDYSDVTLN-HLEEVEILGVVGGRLELKLIRILFAK 357
           ++ ++                   + +S  T++  ++ V I  + G + EL  IR L   
Sbjct: 320 QRLRMIARLEEQTDLVTPVSNCMEDIFSGPTMSLSVKYVVIKDISGTKSELDFIRFLLQY 379

Query: 356 SPSLRKMSIRLSSNTSRKLQILKEIVMFRRAAPNVDV 246
           SP L+KM+++ + N   K +++ E++ FRRA+   +V
Sbjct: 380 SPVLQKMTVKPAENV--KPELMTELIRFRRASGQAEV 414


>ref|XP_003588839.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477887|gb|AES59090.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 532

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
 Frame = -2

Query: 734 ILKILGGFPDLKFLYLDSHCVKSLAAGDLHTRLPTSMLQLIDLLDICL--EDVDQFSSVL 561
           +L+     P ++ L + S  +K L AGD+  +LPT  + L  L  IC+   D+ Q  + L
Sbjct: 307 LLRFFAHLPHIESLVISSQFLKYLDAGDVPVKLPTPCINLSSLF-ICIRFNDLKQILAAL 365

Query: 560 CLIRSSPDLKKFKVF-----HTRRIAXXXXXXXXXXXXEDYSDVTLN-----HLEEVEIL 411
           CL+RSSP+L++ ++      HT  +               + DV L       +  V I 
Sbjct: 366 CLLRSSPNLRRLEIAAKLEKHTDLLTPASYC---------WKDVFLEPPVPLRVRHVSIK 416

Query: 410 GVVGGRLELKLIRILFAKSPSLRKMSIRLSSNTSRKLQILKEIVMFRRAAPNVDVHIDD* 231
           G+     EL  IR L   SP L KM+++L  N + +L  + +I+ F+RA+   +V   + 
Sbjct: 417 GISDNTSELDFIRFLLMYSPMLEKMTVKLEINVTPEL--MTKIIQFKRASEQAEVIYQEN 474

Query: 230 DDCYALASISMHIRLGCISS 171
           D     ++ +M   +G I S
Sbjct: 475 DSSKGTSAGNMKKSVGIIRS 494


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