BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036739
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...   193   4e-47
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...   177   2e-42
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   176   4e-42
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   174   3e-41
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   172   1e-40

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score =  193 bits (490), Expect = 4e-47
 Identities = 109/267 (40%), Positives = 154/267 (57%), Gaps = 1/267 (0%)
 Frame = +1

Query: 7    LPKAMTSTTIAVIPKCEGALTWKQYRPISLCNFTNKIITKVMSSRLATILPYLISDFQAG 186
            L + + S  I +IPK  GA     YRPI+L NF  KII+K+++ RLA I   +IS  Q G
Sbjct: 494  LAQNINSNLIVLIPKVPGARVMGDYRPIALANFQFKIISKILADRLADITMRIISVEQRG 553

Query: 187  FVKERLIEDNILLPQELIHYIDQPGYGGNVLLKLDMSKAFDMLSWKFLQTILTKFGFDAN 366
            F+++R I   ++L  E I+ +++  YGGNV LK+D++KAFD L W FL  +L +FGFD  
Sbjct: 554  FIRDRDISKCVILASEAINLLEKRQYGGNVALKVDIAKAFDTLDWNFLLAVLQRFGFDEK 613

Query: 367  WIQRVMSCISNSWFSVLVNGEAAGFFKSSKGIRQGDPLSPGLFILAEDYLLRSLQKLMQE 546
            ++  ++  + ++  SVLVNG+A GFF  S G+RQGDPLSP LF L E+ L R+L     +
Sbjct: 614  FVHWILVILQSARLSVLVNGKAVGFFTCSHGVRQGDPLSPLLFCLVEEVLSRALSMAATD 673

Query: 547  HPAMSYNTKCNLNIPC-LAYADDCLIFYNGXXXXXXXXXXXXDHYQSVSGQVLNTAKSTC 723
               +  +    ++ P  + YADD LIF  G              Y  VSGQ++N AKS  
Sbjct: 674  GQLIPMSYCRGVSFPTHILYADDVLIFCTGTKRNIRRLIKIFSQYSEVSGQLINNAKSR- 732

Query: 724  IMSSKLTPDRVKKIQLYTGFKKEVLPF 804
              +S +T  RV+ I    GF    LPF
Sbjct: 733  FFTSAMTGSRVQMISSLLGFNVGSLPF 759


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score =  177 bits (449), Expect = 2e-42
 Identities = 88/204 (43%), Positives = 133/204 (65%), Gaps = 1/204 (0%)
 Frame = +1

Query: 25  STTIAVIPKCEGALTWKQYRPISLCNFTNKIITKVMSSRLATILPYLISDFQAGFVKERL 204
           + T+ +IPK + A +  Q+RPI++ NF  KII+K+++ RLA I+P ++S  Q GF++ R 
Sbjct: 174 ANTLILIPKTQNADSMDQFRPIAMANFKFKIISKILADRLAQIMPNIVSQEQRGFIQGRN 233

Query: 205 IEDNILLPQELIHYIDQPGYGGNVLLKLDMSKAFDMLSWKFLQTILTKFGFDANWIQRVM 384
           I+D + L  E I+ +DQ  +GGN+  K+D+SKAFD L+WKFL  +L +FGF   +   + 
Sbjct: 234 IKDCVCLASEAINMLDQKSFGGNLAFKVDISKAFDTLNWKFLLKVLKQFGFSETFCNWID 293

Query: 385 SCISNSWFSVLVNGEAAGFFKSSKGIRQGDPLSPGLFILAEDYLLRSLQKLMQEHPAMSY 564
           + + ++  S+ +NG   G+F  S+G+RQGDPLSP LF LAED L RSL KL+++      
Sbjct: 294 AILQSAKLSICINGSQQGYFSCSRGVRQGDPLSPLLFCLAEDVLSRSLTKLVEQGKLKQM 353

Query: 565 NTKCNLNIPC-LAYADDCLIFYNG 633
               N  +P  + YADD +IF NG
Sbjct: 354 RGTRNCLVPSHILYADDIMIFCNG 377


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  176 bits (447), Expect = 4e-42
 Identities = 98/252 (38%), Positives = 141/252 (55%), Gaps = 3/252 (1%)
 Frame = +1

Query: 4    ALPKAMTSTTIAVIPKCEGALTWKQYRPISLCNFTNKIITKVMSSRLATILPYLISDFQA 183
            +L + M  T +A+IPK +       YRPI+LCNF+ KI+TK+++SRL   +  LISD Q+
Sbjct: 1088 SLLQVMNRTHLALIPKVKAPTHPSHYRPIALCNFSYKILTKIIASRLQPFMSELISDNQS 1147

Query: 184  GFVKERLIEDNILLPQELIHYID--QPGYGGNVLLKLDMSKAFDMLSWKFLQTILTKFGF 357
             FV  R I+DN+++  E+ H++   +    G   LKLDM+KA+D + W FL+ +L K GF
Sbjct: 1148 AFVSNRQIQDNVIIAHEIYHHLKLTRSCNNGAFGLKLDMNKAYDRVEWNFLEAVLRKMGF 1207

Query: 358  DANWIQRVMSCISNSWFSVLVNGEAAGFFKSSKGIRQGDPLSPGLFILAEDYLLRSLQKL 537
              +WI  VMSC++ S  SVL+NG+    F  S+G+RQGDPLSP LF+   D L R + K+
Sbjct: 1208 VDSWIGLVMSCVTTSSLSVLINGKPGPSFLPSRGLRQGDPLSPFLFLFVNDVLSRMINKM 1267

Query: 538  MQEHPAMSYNT-KCNLNIPCLAYADDCLIFYNGXXXXXXXXXXXXDHYQSVSGQVLNTAK 714
             Q+           NL +  L +ADD L F                 Y   SGQ++N  K
Sbjct: 1268 CQDSLLTPVTIGPNNLPVSHLFFADDSLFFLRATLQNCETLSDLLHTYCIASGQLINVEK 1327

Query: 715  STCIMSSKLTPD 750
            S+   S    P+
Sbjct: 1328 SSIFFSPNTPPE 1339


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  174 bits (440), Expect = 3e-41
 Identities = 98/239 (41%), Positives = 137/239 (57%), Gaps = 4/239 (1%)
 Frame = +1

Query: 13   KAMTSTTIAVIPKCEGALTWKQYRPISLCNFTNKIITKVMSSRLATILPYLISDFQAGFV 192
            K +  T +A+IPK +  +    +RPISLC+   K+I+K++++RL   L  +I   Q  F+
Sbjct: 498  KEVNHTFLALIPKVDKPVNANHFRPISLCSTIYKVISKIITNRLKITLGKIIHPLQGAFI 557

Query: 193  KERLIEDNILLPQELIH-YIDQPGYGGNVLLKLDMSKAFDMLSWKFLQTILTKFGFDANW 369
             ERLI+DNIL+  E+ H + ++ G GG + +KLDM KA+D L WK++ T + K GF   W
Sbjct: 558  PERLIQDNILIAHEVFHSFKNKTGRGGWIAIKLDMEKAYDRLEWKYIYTTMDKMGFSPIW 617

Query: 370  IQRVMSCISNSWFSVLVNGEAAGFFKSSKGIRQGDPLSPGLFILAEDYLLRSLQKLMQEH 549
            I+ + SCIS++ FSVLVNG     F  S+GIRQGDPLSP LFIL  + L R   K   E 
Sbjct: 618  IEWIRSCISSASFSVLVNGIPGERFFPSRGIRQGDPLSPYLFILCAELLAREFSKACHE- 676

Query: 550  PAMSYNT---KCNLNIPCLAYADDCLIFYNGXXXXXXXXXXXXDHYQSVSGQVLNTAKS 717
            P         +    IP L +ADD +IF               D Y  +SGQ++N  KS
Sbjct: 677  PGKLIGVPIGRTRTRIPFLTFADDTMIFAKATEASCHKIRQILDKYCLMSGQLVNYHKS 735


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  172 bits (435), Expect = 1e-40
 Identities = 99/262 (37%), Positives = 149/262 (56%), Gaps = 5/262 (1%)
 Frame = +1

Query: 16   AMTSTTIAVIPKCEGALTWKQYRPISLCNFTNKIITKVMSSRLATILPYLISDFQAGFVK 195
            A+  T I +IPK +   +   +RPISLCN   KI+ KV+++R+  +LP +I + Q+GFV 
Sbjct: 492  AVNQTHIVLIPKKKHCESPVDFRPISLCNVLYKIVAKVLANRMKMVLPMVIHESQSGFVP 551

Query: 196  ERLIEDNILLPQELIHYI--DQPGYGGNVLLKLDMSKAFDMLSWKFLQTILTKFGFDANW 369
             RLI DN+L+  E  H++   + G  G + LKLDMSKA+D + W FL+ ++ K GF   +
Sbjct: 552  GRLITDNVLVAYECFHFLRKKKTGKKGYLGLKLDMSKAYDRVEWCFLENMMLKLGFPTRY 611

Query: 370  IQRVMSCISNSWFSVLVNGEAAGFFKSSKGIRQGDPLSPGLFILAEDYLLRSLQKLMQEH 549
             + VM+C++++ FSVLVNG+ +  F  S+G+RQGDPLSP LF++  + L   L+    E 
Sbjct: 612  TKLVMNCVTSARFSVLVNGQPSRNFFPSRGLRQGDPLSPFLFVVCAEGLSTLLRD--AEE 669

Query: 550  PAMSYNTKCNLN---IPCLAYADDCLIFYNGXXXXXXXXXXXXDHYQSVSGQVLNTAKST 720
              + +  K       I  L +ADD L+F                 Y++ SGQ LN  KS 
Sbjct: 670  KKVIHGVKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDILSTYEAASGQKLNMEKSE 729

Query: 721  CIMSSKLTPDRVKKIQLYTGFK 786
               S  L PD++  +Q+   FK
Sbjct: 730  MSYSRNLEPDKINTLQMKLAFK 751