BLASTX nr result

ID: Lithospermum22_contig00036727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036727
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513785.1| zinc finger protein, putative [Ricinus commu...   163   4e-38
ref|XP_002302246.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
ref|XP_002284442.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   131   1e-28
emb|CAN68008.1| hypothetical protein VITISV_014950 [Vitis vinifera]   131   1e-28
ref|XP_003601068.1| RING finger protein [Medicago truncatula] gi...   124   2e-26

>ref|XP_002513785.1| zinc finger protein, putative [Ricinus communis]
           gi|223546871|gb|EEF48368.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 382

 Score =  163 bits (412), Expect = 4e-38
 Identities = 92/222 (41%), Positives = 119/222 (53%), Gaps = 3/222 (1%)
 Frame = -2

Query: 659 SMSVPQSGSITGTISARNYRVYWCYQCHQTVRVADHNQSNIACPRCLGEFLDEVDVGSPG 480
           S+S P++   T   + R ++ YWCYQCH+ VR+A  + S I CPRC  +FL E+++    
Sbjct: 2   SLSPPRTRIRTYDATTRTFQPYWCYQCHRMVRIAASDPSEIICPRCSSQFLCELEMNRQR 61

Query: 479 NGLDITEFDPSPQSRLVEXXXXXXXXXXXXXXLDGRERRFLDIGMQNPRHRSDARGRMYN 300
             +D   FDPSP++RL+E                 R RR LD G+  P      RGR + 
Sbjct: 62  LVVDFAAFDPSPEARLLEALSLTLDPPIRR-----RRRRTLDFGLDEPEW--GTRGRSWF 114

Query: 299 RDPVASGEFWPRRQISIFEDQTDDWSPGSGIVAGPRAWI--RP-GGLLPAIFDTETERSA 129
             P    E  PRR+ +   D  D+W    GI   PR WI  RP     P   ++ T    
Sbjct: 115 GRPNPEAEIHPRRRRNRSLDGRDNWEEEPGIQPSPRTWIVLRPFDPFSPIQPNSRTGNLI 174

Query: 128 PSRVEPRDYFLGPGLQGLIEDITQNDRPGPPPAPEFTISAIP 3
           P R  PRDYFLGPGL  LIE +TQ+DRPGPPPAPE T+ AIP
Sbjct: 175 PPRANPRDYFLGPGLNDLIEQLTQDDRPGPPPAPESTVGAIP 216


>ref|XP_002302246.1| predicted protein [Populus trichocarpa] gi|222843972|gb|EEE81519.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score =  134 bits (338), Expect = 2e-29
 Identities = 94/235 (40%), Positives = 118/235 (50%), Gaps = 16/235 (6%)
 Frame = -2

Query: 659 SMSVPQSGSITGTISARNYRVYWCYQCHQTVRVADHNQSNIACPRCLGEFLDEVDVGSPG 480
           S+S P++ +  GT    N++ YWCYQCHQ VR+A  + S I CPRC G+FL E+ +  P 
Sbjct: 2   SLSPPRTRT-NGTTG--NFQPYWCYQCHQMVRIATTDPSEIICPRCSGQFLCEIGINRPI 58

Query: 479 NGLDITEFDPSPQSRLVEXXXXXXXXXXXXXXLDGRERRF---LDIGMQNPRHRS----- 324
             +D T FDPSP++RL+E              LD   RRF   LD     P  RS     
Sbjct: 59  LVVDFTAFDPSPEARLLE---------ALSLMLDPPIRRFNYSLDEPEPEPPRRSWRRNL 109

Query: 323 ----DARGRMYNRDPVASGEFWPRRQISIFEDQTDDWSPGSGIVAGPRAWI--RPGGLLP 162
               D R    + DP    E  PRR      D         GI + PR WI  RP   L 
Sbjct: 110 SLELDGRDNWDSLDP----EIRPRRSRDWSLDGRGILEHEPGIQSRPRTWIQYRPRNPLG 165

Query: 161 AIFDTETERSAPSR--VEPRDYFLGPGLQGLIEDITQNDRPGPPPAPEFTISAIP 3
              +  ++   P R  V+PRD+F+G GL  LIE +TQNDR GPPPAPE  I  IP
Sbjct: 166 EPIEPLSQSENPVRPLVDPRDFFVGSGLNELIEQLTQNDRQGPPPAPEIAIDTIP 220


>ref|XP_002284442.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 333

 Score =  131 bits (330), Expect = 1e-28
 Identities = 84/220 (38%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
 Frame = -2

Query: 611 RNYRVYWCYQCHQTVRVADHNQSNIACPRCLGEFLDEVDVGSPGNGLDITEFDPSPQSRL 432
           R Y+ YWCYQC+++VR+A  N S I CPRCLG+FL E+D   P    +I  +DP P++RL
Sbjct: 14  RTYQFYWCYQCNRSVRIASDNPSQIICPRCLGQFLQEIDTTRPRAFNEIITWDPFPEARL 73

Query: 431 VEXXXXXXXXXXXXXXLD-GRERRFLDIGMQNPRHRSDARGRMYNRDPVASGEFW----- 270
           +E                 GR       G +     +  RGR + R    S E W     
Sbjct: 74  LEALSLVLDPPLRGLNNGVGR-------GDEAETEAARNRGRRWLRRRSHSREHWEAEAD 126

Query: 269 ---PRRQISIFEDQTDDWSPGSGIVAGPRAWI--RP------GGLLPAIFDTETERSAPS 123
              P R+ +        W  G+G+ A  R WI  RP       G  P     ++E   P 
Sbjct: 127 TGVPGRRRNNELGGRLGWPFGNGLGAQGRTWIVLRPTGPPGQNGPFP-----QSENMRPP 181

Query: 122 RVEPRDYFLGPGLQGLIEDITQNDRPGPPPAPEFTISAIP 3
           R E RD+F GPGL  LIE++TQNDRPGPPPAP+  I+A+P
Sbjct: 182 RFELRDFFSGPGLNELIEELTQNDRPGPPPAPDSAINAMP 221


>emb|CAN68008.1| hypothetical protein VITISV_014950 [Vitis vinifera]
          Length = 409

 Score =  131 bits (330), Expect = 1e-28
 Identities = 84/220 (38%), Positives = 111/220 (50%), Gaps = 17/220 (7%)
 Frame = -2

Query: 611 RNYRVYWCYQCHQTVRVADHNQSNIACPRCLGEFLDEVDVGSPGNGLDITEFDPSPQSRL 432
           R Y+ YWCYQC+++VR+A  N S I CPRCLG+FL E+D   P    +I  +DP P++RL
Sbjct: 14  RTYQFYWCYQCNRSVRIASDNPSQIICPRCLGQFLQEIDTTRPRAFNEIITWDPFPEARL 73

Query: 431 VEXXXXXXXXXXXXXXLD-GRERRFLDIGMQNPRHRSDARGRMYNRDPVASGEFW----- 270
           +E                 GR       G +     +  RGR + R    S E W     
Sbjct: 74  LEALSLVLDPPLRGLNNGVGR-------GDEAETEAARNRGRRWLRRRSHSREHWEAEAD 126

Query: 269 ---PRRQISIFEDQTDDWSPGSGIVAGPRAWI--RP------GGLLPAIFDTETERSAPS 123
              P R+ +        W  G+G+ A  R WI  RP       G  P     ++E   P 
Sbjct: 127 TGVPGRRRNNELGGRLGWPFGNGLGAQGRTWIVLRPTGPPGQNGPFP-----QSENMRPP 181

Query: 122 RVEPRDYFLGPGLQGLIEDITQNDRPGPPPAPEFTISAIP 3
           R E RD+F GPGL  LIE++TQNDRPGPPPAP+  I+A+P
Sbjct: 182 RFELRDFFSGPGLNELIEELTQNDRPGPPPAPDSAINAMP 221


>ref|XP_003601068.1| RING finger protein [Medicago truncatula]
           gi|355490116|gb|AES71319.1| RING finger protein
           [Medicago truncatula]
          Length = 328

 Score =  124 bits (312), Expect = 2e-26
 Identities = 78/216 (36%), Positives = 110/216 (50%), Gaps = 13/216 (6%)
 Frame = -2

Query: 611 RNYRVYWCYQCHQTVRVADHNQSNIACPRCLGEFLDEVDVGSPGNGLDITEFDPSPQSRL 432
           RN+++Y+C+QC++TVRVA +N S++ CPRC G+F+ E+++  P   +D T  DPSP++RL
Sbjct: 15  RNFQLYYCFQCNRTVRVAPYNSSDLICPRCFGQFICEINIPRPRLVVDFTAHDPSPEARL 74

Query: 431 VEXXXXXXXXXXXXXXLDGRERRFLDIGMQNPRHRSDARGRMYNRDPV--ASGEFWPRRQ 258
           +E              LD   RRF      NP  ++    R     PV   +G+  P   
Sbjct: 75  LE---------ALSIMLDPPIRRF------NPETQTRRPRRATQEVPVRRRTGDHHP--- 116

Query: 257 ISIFEDQTDDWSPGSGIVAGPRAWI-----------RPGGLLPAIFDTETERSAPSRVEP 111
               + QT+   P  GI   PR W+                 P I+    +   P  V+ 
Sbjct: 117 ---IQTQTE---PEPGIQHRPRTWVILQPVDPSSNSDSNTFQPVIYPGGRQGPIPRGVDS 170

Query: 110 RDYFLGPGLQGLIEDITQNDRPGPPPAPEFTISAIP 3
           RDYF GPG   LI+ IT+NDR GPPP PE  I+AIP
Sbjct: 171 RDYFFGPGFNELIDQITENDRQGPPPVPERGINAIP 206


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