BLASTX nr result

ID: Lithospermum22_contig00036636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036636
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    69   3e-10
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    68   9e-10
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    68   9e-10
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    67   2e-09
gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japo...    67   2e-09

>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/59 (54%), Positives = 41/59 (69%)
 Frame = -3

Query: 295 RYF*HSSFLNAKMGSRPSFGWRSLLDGRRVLRKGGRWRVGDGRSIDMWKEHWVPRETDF 119
           RYF  +SFL+A +GS PSF WRS++  RR+L  G RWRVG+G SI +  + WVPR   F
Sbjct: 137 RYFPQTSFLDALVGSNPSFTWRSIVGSRRLLNAGLRWRVGNGASISVKYDKWVPRPHSF 195


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/55 (54%), Positives = 39/55 (70%)
 Frame = -3

Query: 298  GRYF*HSSFLNAKMGSRPSFGWRSLLDGRRVLRKGGRWRVGDGRSIDMWKEHWVP 134
            GRYF +SSF  A     PSF WRSLL GR +L KG RW VGDG++I ++ ++W+P
Sbjct: 902  GRYFPNSSFWEAAQPKSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIP 956


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/55 (54%), Positives = 39/55 (70%)
 Frame = -3

Query: 298  GRYF*HSSFLNAKMGSRPSFGWRSLLDGRRVLRKGGRWRVGDGRSIDMWKEHWVP 134
            GRYF +SSF  A     PSF WRSLL GR +L KG RW VGDG++I ++ ++W+P
Sbjct: 859  GRYFPNSSFWEAAQPKSPSFTWRSLLFGRELLAKGVRWGVGDGKTIKIFSDNWIP 913


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/59 (52%), Positives = 40/59 (67%)
 Frame = -3

Query: 295 RYF*HSSFLNAKMGSRPSFGWRSLLDGRRVLRKGGRWRVGDGRSIDMWKEHWVPRETDF 119
           RYF  +SFL+A +GS PSF WRS++  R +L  G RWRVG+G SI +  + WVPR   F
Sbjct: 137 RYFPQTSFLDALVGSNPSFTWRSIVGSRSLLNAGLRWRVGNGASISVKYDKWVPRPHSF 195


>gb|EEE66057.1| hypothetical protein OsJ_22054 [Oryza sativa Japonica Group]
          Length = 940

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/55 (52%), Positives = 39/55 (70%)
 Frame = -3

Query: 298 GRYF*HSSFLNAKMGSRPSFGWRSLLDGRRVLRKGGRWRVGDGRSIDMWKEHWVP 134
           GRYF +S F NA   +  SF WRS+L GR +LRKG RW +G+G S+ + K+HW+P
Sbjct: 460 GRYFPNSDFWNAPKPTAASFTWRSILFGRDLLRKGVRWGIGNGSSVKILKDHWIP 514


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