BLASTX nr result

ID: Lithospermum22_contig00036598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036598
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632427.1| PREDICTED: U-box domain-containing protein 3...   129   5e-28
ref|XP_002277883.1| PREDICTED: U-box domain-containing protein 3...   129   5e-28
ref|XP_002302042.1| predicted protein [Populus trichocarpa] gi|2...   125   7e-27
ref|XP_003520603.1| PREDICTED: U-box domain-containing protein 3...   123   3e-26
ref|XP_002306856.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25

>ref|XP_003632427.1| PREDICTED: U-box domain-containing protein 3-like isoform 2 [Vitis
           vinifera]
          Length = 757

 Score =  129 bits (324), Expect = 5e-28
 Identities = 73/127 (57%), Positives = 88/127 (69%), Gaps = 2/127 (1%)
 Frame = +2

Query: 272 MKLTSVSCLTNSISRFIHLATCCAAK-IPSQSVFKIMASCLKQLKPLLDNVLDNKIPTDD 448
           M   SV CL NSISRFIHL +C   K +P Q   + M   LK LKP+LD+V++ KIP+D+
Sbjct: 1   MDTKSVRCLINSISRFIHLVSCQTLKPMPIQKDCRNMVGLLKLLKPVLDDVVNCKIPSDE 60

Query: 449 TVCNVCEELDMAVNEAREFLEKWSPKMSTILCVLQSEQLLFTIQSSSRKITYTLHELL-E 625
            +   CEELDMAVNEAREF+E W PKMS I  VLQSEQL+  IQSSS +I + L  LL  
Sbjct: 61  ILFKECEELDMAVNEAREFVENWCPKMSKIFSVLQSEQLVMKIQSSSLEICFILCRLLHS 120

Query: 626 APSTSNL 646
           +PS SNL
Sbjct: 121 SPSVSNL 127


>ref|XP_002277883.1| PREDICTED: U-box domain-containing protein 3-like isoform 1 [Vitis
           vinifera]
          Length = 764

 Score =  129 bits (324), Expect = 5e-28
 Identities = 73/127 (57%), Positives = 88/127 (69%), Gaps = 2/127 (1%)
 Frame = +2

Query: 272 MKLTSVSCLTNSISRFIHLATCCAAK-IPSQSVFKIMASCLKQLKPLLDNVLDNKIPTDD 448
           M   SV CL NSISRFIHL +C   K +P Q   + M   LK LKP+LD+V++ KIP+D+
Sbjct: 1   MDTKSVRCLINSISRFIHLVSCQTLKPMPIQKDCRNMVGLLKLLKPVLDDVVNCKIPSDE 60

Query: 449 TVCNVCEELDMAVNEAREFLEKWSPKMSTILCVLQSEQLLFTIQSSSRKITYTLHELL-E 625
            +   CEELDMAVNEAREF+E W PKMS I  VLQSEQL+  IQSSS +I + L  LL  
Sbjct: 61  ILFKECEELDMAVNEAREFVENWCPKMSKIFSVLQSEQLVMKIQSSSLEICFILCRLLHS 120

Query: 626 APSTSNL 646
           +PS SNL
Sbjct: 121 SPSVSNL 127


>ref|XP_002302042.1| predicted protein [Populus trichocarpa] gi|222843768|gb|EEE81315.1|
           predicted protein [Populus trichocarpa]
          Length = 753

 Score =  125 bits (314), Expect = 7e-27
 Identities = 70/131 (53%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
 Frame = +2

Query: 272 MKLTSVSCLTNSISRFIHLATCCAAK-IPSQSVFKIMASCLKQLKPLLDNVLDNKIPTDD 448
           M+ +SV CL NSISRF+HL +C   K +P Q  ++IM   LK LKP+LD V D  I +D+
Sbjct: 1   METSSVRCLINSISRFMHLVSCQTKKYMPIQKDYEIMVIMLKHLKPVLDEVDDYNISSDE 60

Query: 449 TVCNVCEELDMAVNEAREFLEKWSPKMSTILCVLQSEQLLFTIQSSSRKITYTLHELLE- 625
            +C  CEELD+AVNEAREF+EKW P+MS I  V QSE LL  IQSS+ +I   L  LL+ 
Sbjct: 61  ILCRECEELDVAVNEAREFMEKWCPQMSRICSVQQSEALLKKIQSSALEICQVLCRLLQG 120

Query: 626 APSTSNLPFPQ 658
           +P+TS+L   Q
Sbjct: 121 SPTTSSLTIVQ 131


>ref|XP_003520603.1| PREDICTED: U-box domain-containing protein 3-like [Glycine max]
          Length = 759

 Score =  123 bits (309), Expect = 3e-26
 Identities = 65/120 (54%), Positives = 84/120 (70%), Gaps = 1/120 (0%)
 Frame = +2

Query: 281 TSVSCLTNSISRFIHLATCCAAK-IPSQSVFKIMASCLKQLKPLLDNVLDNKIPTDDTVC 457
           +SV CL NSISRFIHL +C A K +P Q     M   LK LKP+LD+++D KIP D+ + 
Sbjct: 7   SSVKCLVNSISRFIHLVSCQAVKPMPLQKNCNNMVCVLKHLKPVLDDIVDFKIPFDENLH 66

Query: 458 NVCEELDMAVNEAREFLEKWSPKMSTILCVLQSEQLLFTIQSSSRKITYTLHELLEAPST 637
             CEELDM VNEAREF+EKW PKMS I  VLQS +LL  +Q+SS KI + + + L+ P++
Sbjct: 67  RECEELDMRVNEAREFIEKWGPKMSRIHSVLQSGELLIKLQNSSYKICHMIVKSLKGPAS 126


>ref|XP_002306856.1| predicted protein [Populus trichocarpa] gi|222856305|gb|EEE93852.1|
           predicted protein [Populus trichocarpa]
          Length = 748

 Score =  120 bits (302), Expect = 2e-25
 Identities = 68/131 (51%), Positives = 84/131 (64%), Gaps = 2/131 (1%)
 Frame = +2

Query: 272 MKLTSVSCLTNSISRFIHLATCCAAK-IPSQSVFKIMASCLKQLKPLLDNVLDNKIPTDD 448
           M  +SV CL N+ISRFIHL +C   K +P Q  +K M   LK LKP+LD V+D  I +D+
Sbjct: 1   MDTSSVRCLINTISRFIHLVSCQTRKFMPIQKDYKSMVMMLKHLKPVLDGVVDYSISSDE 60

Query: 449 TVCNVCEELDMAVNEAREFLEKWSPKMSTILCVLQSEQLLFTIQSSSRKITYTLHELLE- 625
            +C  CEELD  VNEAREF+E W P+MS I  V QSE LL  IQSS+ +I   L  LL+ 
Sbjct: 61  VLCKECEELDTTVNEAREFMENWCPQMSKICSVQQSEALLKKIQSSALEICQILCRLLQS 120

Query: 626 APSTSNLPFPQ 658
           +PS S L   Q
Sbjct: 121 SPSASTLTIVQ 131


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