BLASTX nr result

ID: Lithospermum22_contig00036546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036546
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526386.1| conserved hypothetical protein [Ricinus comm...   165   4e-39
ref|XP_004163669.1| PREDICTED: Bloom syndrome protein homolog [C...   159   3e-37
ref|XP_002319444.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent hel...   156   2e-36
ref|XP_004165735.1| PREDICTED: Werner syndrome ATP-dependent hel...   155   3e-36

>ref|XP_002526386.1| conserved hypothetical protein [Ricinus communis]
           gi|223534248|gb|EEF35962.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 795

 Score =  165 bits (417), Expect = 4e-39
 Identities = 79/99 (79%), Positives = 88/99 (88%)
 Frame = +3

Query: 6   LLIAGICLLAVDEAHCISEWGHDFRVEYKRLDKLRNILSNVPFVGLTATATEKVRNDIIN 185
           LL  G+CLLAVDEAHCISEWGHDFRVEYK+L KLRNIL +VPFVGLTATAT KVR DIIN
Sbjct: 122 LLKVGVCLLAVDEAHCISEWGHDFRVEYKQLYKLRNILLDVPFVGLTATATAKVRFDIIN 181

Query: 186 SLKLKDTYVAVGSFDRQNLFYGVKSFNRGSSFFDKLIQE 302
           SLK+ D Y++VGSFDR+NLFYGVK FNRGS F D+L+QE
Sbjct: 182 SLKMNDPYISVGSFDRKNLFYGVKHFNRGSQFMDELVQE 220


>ref|XP_004163669.1| PREDICTED: Bloom syndrome protein homolog [Cucumis sativus]
          Length = 1050

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/98 (76%), Positives = 85/98 (86%)
 Frame = +3

Query: 3   RLLIAGICLLAVDEAHCISEWGHDFRVEYKRLDKLRNILSNVPFVGLTATATEKVRNDII 182
           +L  AGICL AVDEAHCISEWGHDFRVEYK+LDKLR++L  +PFV LTATATEKVRNDII
Sbjct: 486 KLKTAGICLFAVDEAHCISEWGHDFRVEYKQLDKLRDVLPGLPFVALTATATEKVRNDII 545

Query: 183 NSLKLKDTYVAVGSFDRQNLFYGVKSFNRGSSFFDKLI 296
           NSLK+KD  V +GSFDR NLFYGVKSF+RG  F +KL+
Sbjct: 546 NSLKMKDPQVTIGSFDRTNLFYGVKSFDRGPLFMNKLV 583


>ref|XP_002319444.1| predicted protein [Populus trichocarpa] gi|222857820|gb|EEE95367.1|
           predicted protein [Populus trichocarpa]
          Length = 854

 Score =  158 bits (399), Expect = 5e-37
 Identities = 77/100 (77%), Positives = 86/100 (86%)
 Frame = +3

Query: 3   RLLIAGICLLAVDEAHCISEWGHDFRVEYKRLDKLRNILSNVPFVGLTATATEKVRNDII 182
           +LL AGICL AVDEAHCISEWGHDFRVEYK+L KLR++L  VPFV LTATATEKVR DII
Sbjct: 87  KLLEAGICLFAVDEAHCISEWGHDFRVEYKQLYKLRDVLLEVPFVALTATATEKVRIDII 146

Query: 183 NSLKLKDTYVAVGSFDRQNLFYGVKSFNRGSSFFDKLIQE 302
           NSLK+ + YVAVGSFDR+NLFYGVK FNR   F D+L+QE
Sbjct: 147 NSLKMNNPYVAVGSFDRKNLFYGVKHFNRSLQFVDELVQE 186


>ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine
           max]
          Length = 920

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/99 (76%), Positives = 84/99 (84%)
 Frame = +3

Query: 6   LLIAGICLLAVDEAHCISEWGHDFRVEYKRLDKLRNILSNVPFVGLTATATEKVRNDIIN 185
           LL AGI L AVDEAHCISEWGHDFRVEYK LDKLR +L +VPFVGLTATATEKVR DII+
Sbjct: 127 LLKAGISLFAVDEAHCISEWGHDFRVEYKHLDKLREVLLDVPFVGLTATATEKVRYDIIS 186

Query: 186 SLKLKDTYVAVGSFDRQNLFYGVKSFNRGSSFFDKLIQE 302
           SLKL + YV +GSFDR NLFYGVK  NRG SF D+L++E
Sbjct: 187 SLKLNNPYVTIGSFDRTNLFYGVKLLNRGQSFIDELVRE 225


>ref|XP_004165735.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Cucumis
           sativus]
          Length = 919

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/98 (74%), Positives = 85/98 (86%)
 Frame = +3

Query: 3   RLLIAGICLLAVDEAHCISEWGHDFRVEYKRLDKLRNILSNVPFVGLTATATEKVRNDII 182
           +L  AGICL AVDEAHCISEWGHDFRVEYK+LDKLR++L ++PFV LTATATEKVR+DII
Sbjct: 121 KLKKAGICLFAVDEAHCISEWGHDFRVEYKQLDKLRDVLPDLPFVALTATATEKVRSDII 180

Query: 183 NSLKLKDTYVAVGSFDRQNLFYGVKSFNRGSSFFDKLI 296
           NSLK+KD  V +GSFDR NLFYGVKSFNRG  F ++ +
Sbjct: 181 NSLKMKDPQVTIGSFDRTNLFYGVKSFNRGPLFMNEFV 218


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