BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036541
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    62   1e-10
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   5e-10
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    60   9e-10
gb|EEC69280.1| hypothetical protein OsI_38331 [Oryza sativa Indi...    60   1e-09
gb|AAX95129.1| retrotransposon protein, putative, unclassified [...    62   1e-09

>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 62.0 bits (149), Expect(2) = 1e-10
 Identities = 30/85 (35%), Positives = 49/85 (57%)
 Frame = -1

Query: 384 GLLKWKREKLGHIQNSIRDKQEELDRLQQSVLTVSLKDRATVLARDIDKLREADDVYWCQ 205
           GL +W +E  G ++  +   +EELD LQ+   T ++  +   +   +D + E +++ W Q
Sbjct: 567 GLKRWNQETFGSVKKKVASLREELDVLQRQPPTSNIICKRNEVECLLDGVLEREELLWKQ 626

Query: 204 RSRVIWRVKGDRNTAFFHVISAQKG 130
           R+RV W   GDRNT FFH  + Q+G
Sbjct: 627 RARVSWFKCGDRNTQFFHQTAKQRG 651



 Score = 28.5 bits (62), Expect(2) = 1e-10
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -2

Query: 137 KRGKTNLIRVLQDEAGVWERDMVNIQTLATRFYSNLFTSQTG 12
           +RG++N I  +  E   W  D+ +I  +   ++ NLFT+  G
Sbjct: 649 QRGRSNRICGILGEDNRWRSDVTDIGCVFVSYFRNLFTAGGG 690


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 59.7 bits (143), Expect(2) = 5e-10
 Identities = 29/77 (37%), Positives = 42/77 (54%)
 Frame = -1

Query: 381 LLKWKREKLGHIQNSIRDKQEELDRLQQSVLTVSLKDRATVLARDIDKLREADDVYWCQR 202
           LL W ++K GH+   IR  Q ++  L +S  +         L   +D+L + ++VYW QR
Sbjct: 289 LLSWSKQKFGHVAKEIRMCQHQMKVLMESEPSEDNIMHMRALDARMDELEKREEVYWHQR 348

Query: 201 SRVIWRVKGDRNTAFFH 151
           SR  W   GD+NT FFH
Sbjct: 349 SRQDWIKSGDKNTKFFH 365



 Score = 28.9 bits (63), Expect(2) = 5e-10
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -2

Query: 134 RGKTNLIRVLQDEAGVWERDMVNIQTLATRFYSNLFTSQTGGN 6
           R + N +R +++EAG W  D  ++      ++ NLF  Q+G N
Sbjct: 371 REQRNNVRRIRNEAGEWFEDEDDVTECFAHYFENLF--QSGNN 411


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 60.5 bits (145), Expect(2) = 9e-10
 Identities = 27/84 (32%), Positives = 47/84 (55%)
 Frame = -1

Query: 384 GLLKWKREKLGHIQNSIRDKQEELDRLQQSVLTVSLKDRATVLARDIDKLREADDVYWCQ 205
           GL  W    LG ++  ++  ++EL+  ++  ++     R  VL   ++KL +  D+YW Q
Sbjct: 535 GLSSWSSNVLGDLEKRVKKVKKELETCRRQPISRDQVVREEVLRYRLEKLEQQVDIYWKQ 594

Query: 204 RSRVIWRVKGDRNTAFFHVISAQK 133
           R+   W  KGDRNT+FFH   +++
Sbjct: 595 RAHTNWLNKGDRNTSFFHASCSER 618



 Score = 27.3 bits (59), Expect(2) = 9e-10
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -2

Query: 137 KRGKTNLIRVLQDEAGVWERDMVNIQTLATRFYSNLFTSQTGGN 6
           +R + N I  L+ E G W     + + +   F+  LFTS  G N
Sbjct: 617 ERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQN 660


>gb|EEC69280.1| hypothetical protein OsI_38331 [Oryza sativa Indica Group]
          Length = 320

 Score = 60.1 bits (144), Expect(2) = 1e-09
 Identities = 27/84 (32%), Positives = 47/84 (55%)
 Frame = -1

Query: 384 GLLKWKREKLGHIQNSIRDKQEELDRLQQSVLTVSLKDRATVLARDIDKLREADDVYWCQ 205
           GL  W    LG ++  ++  ++EL+  ++  ++     R  VL   ++KL +  D+YW Q
Sbjct: 81  GLSSWSSNVLGDLEKRVKKVKKELETCRRQPISRDPVVREEVLRYRLEKLEQQVDIYWKQ 140

Query: 204 RSRVIWRVKGDRNTAFFHVISAQK 133
           R+   W  KGDRNT+FFH   +++
Sbjct: 141 RAHTNWLNKGDRNTSFFHASCSER 164



 Score = 27.3 bits (59), Expect(2) = 1e-09
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -2

Query: 137 KRGKTNLIRVLQDEAGVWERDMVNIQTLATRFYSNLFTSQTGGN 6
           +R + N I  L+ E G W     + + +   F+  LFTS  G N
Sbjct: 163 ERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQN 206


>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|62733115|gb|AAX95232.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 1324

 Score = 62.4 bits (150), Expect(2) = 1e-09
 Identities = 29/83 (34%), Positives = 48/83 (57%)
 Frame = -1

Query: 381 LLKWKREKLGHIQNSIRDKQEELDRLQQSVLTVSLKDRATVLARDIDKLREADDVYWCQR 202
           L  W +  LG ++  I+  ++ L+  ++S ++ S   R  VL   +DKL E  ++YW QR
Sbjct: 736 LWDWSKNFLGDLEKRIKKAKQALEAHRRSPISSSTASREAVLKYRLDKLEEQRELYWRQR 795

Query: 201 SRVIWRVKGDRNTAFFHVISAQK 133
           +   W  KGDRNT FFH  ++++
Sbjct: 796 ANQHWLEKGDRNTKFFHECASER 818



 Score = 24.6 bits (52), Expect(2) = 1e-09
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 137 KRGKTNLIRVLQDEAGVWERDMVNIQTLATRFYSNLFTSQTGGNL 3
           +R K N I+ L+ + G    D     +L + FY  LFT+    NL
Sbjct: 817 ERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTAGVPLNL 861