BLASTX nr result

ID: Lithospermum22_contig00036517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036517
         (1179 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]           122   2e-25
ref|XP_002330425.1| predicted protein [Populus trichocarpa] gi|2...   118   3e-24
gb|AAC33276.1| cotton fiber expressed protein 1 [Gossypium hirsu...   117   6e-24
ref|XP_002316652.1| predicted protein [Populus trichocarpa] gi|2...   116   1e-23
ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244...   115   3e-23

>gb|AAY85179.1| fiber expressed protein [Gossypium hirsutum]
          Length = 331

 Score =  122 bits (306), Expect = 2e-25
 Identities = 98/324 (30%), Positives = 151/324 (46%), Gaps = 22/324 (6%)
 Frame = -2

Query: 1178 KILLISSGVILLAMMMKLTIIPWLINFTMSELPIIWSFLVSLCKPPYLYXXXXXXXXXXX 999
            K+ LIS+G++ + + +K+++ P ++ F++S+ P+ WS   S  KPPYLY           
Sbjct: 12   KVFLISTGILGIVLGLKISV-PLVLEFSVSQAPLWWSGFRSWLKPPYLYVVINGIIITIA 70

Query: 998  ASSRFTRTETETDSNFQ-HFRPLISARTPPRIETQ------HDMFVAASYXXXXXXXXXX 840
            ASSRF +   E D   Q   RP ISA   P +E +       D   ++ +          
Sbjct: 71   ASSRFNQNNGEKDQMEQMQPRPKISADQQPMVEYETKSGWDSDAVESSDFVYEENQRGEE 130

Query: 839  XXXXXXXXXXXXXXXXEID--EGALVREMDVP--REQEVVLP-----VRRKARGLSRFGP 687
                            + D  E  + +   +P  R     +P     ++ K    SRFG 
Sbjct: 131  VETRVSEEESNVAVKDDRDGNEFVISKSEWIPPSRTDSSEIPLDALLIQEKPAPSSRFGH 190

Query: 686  PKPPHATPKGKSEVTTEESINRQDQEVTLESMWNMIMEGREKPFDQSMKKSELLDDYTRK 507
             KP  A P+G   +   +    +    TLE+ W MI EG+  P  + +KKS+  +++ R 
Sbjct: 191  RKPVKANPEGGRALKAAKPKRHE----TLENTWKMITEGKSMPLSRHLKKSDTWENHGRD 246

Query: 506  VDDERPLNEPSVSTP------TNSQFPKTSLKGRATYLCESPVKSWILKKEPSLGQEELN 345
            ++ E   + P +         TN Q P   +         S   S  L+KEPSL Q+ELN
Sbjct: 247  INMEALTSSPLMKKSETFRDRTNYQLPPEQVS--------SFPASGKLRKEPSLSQDELN 298

Query: 344  RRADAFIQKFNEEMRMQRQQSLMQ 273
            RR +AFI+KFN+EMR+QRQ+SL Q
Sbjct: 299  RRVEAFIKKFNDEMRLQRQESLNQ 322


>ref|XP_002330425.1| predicted protein [Populus trichocarpa] gi|222871810|gb|EEF08941.1|
            predicted protein [Populus trichocarpa]
          Length = 296

 Score =  118 bits (295), Expect = 3e-24
 Identities = 94/307 (30%), Positives = 150/307 (48%), Gaps = 5/307 (1%)
 Frame = -2

Query: 1178 KILLISSGVILLAMMMKLTIIPWLINFTMSELPIIWSFLVSLCKPPYLYXXXXXXXXXXX 999
            K+ LIS+GV+ LA+++KL+++  + +F +SELPI++S ++S  +PPYLY           
Sbjct: 16   KVALISAGVLSLAVILKLSVLSVVADFAVSELPIMYSSVLSWLQPPYLYLVVNCIIISIV 75

Query: 998  ASSRFTRTETETDSNFQHFRPLISART--PPRIETQHDMFVAASYXXXXXXXXXXXXXXX 825
            ASS+    +   +       PL S+     P ++ ++    A S                
Sbjct: 76   ASSKLQLQKPSQEQQV----PLPSSADIIAPPVQVENISVRARSDYD------------- 118

Query: 824  XXXXXXXXXXXEIDEGALVREMDVPREQEVVLPVRRKARGLSRFGPPKPPHATPKG--KS 651
                         ++ A+V         E +   + K    +R G  K   ATP+G  K+
Sbjct: 119  -------------NDAAVVSSYQYAPSMEFLFE-KEKPLVSARLGRRKSLKATPEGNGKA 164

Query: 650  EVTTEESINRQDQEVTLESMWNMIMEGREKPFDQSMKKSELLDDYTRKVDDERPLNEPSV 471
                   +++  +  TLES W  I +GR  P  + +KKS+  + + R+ D  RP   P +
Sbjct: 165  PAPAALGVSKPKRYDTLESTWKTITDGRPMPLTRHLKKSDTWETHVRR-DSTRP---PKL 220

Query: 470  STPTNSQFPKTSLKGRATYLCESPVKSW-ILKKEPSLGQEELNRRADAFIQKFNEEMRMQ 294
             T  +  F   S   +   L  SP  S  ++ +EPSLGQ+ELN+R +AFI+KFNEEMR+Q
Sbjct: 221  -TKKSETFNDRSSSSKPEKLARSPQGSGKLIGREPSLGQDELNKRVEAFIKKFNEEMRLQ 279

Query: 293  RQQSLMQ 273
            RQ+SL Q
Sbjct: 280  RQESLNQ 286


>gb|AAC33276.1| cotton fiber expressed protein 1 [Gossypium hirsutum]
          Length = 331

 Score =  117 bits (293), Expect = 6e-24
 Identities = 95/324 (29%), Positives = 147/324 (45%), Gaps = 22/324 (6%)
 Frame = -2

Query: 1178 KILLISSGVILLAMMMKLTIIPWLINFTMSELPIIWSFLVSLCKPPYLYXXXXXXXXXXX 999
            K+LLIS+G++ +A+ +K+++ P ++ F++S+ P+ WS   S  KPPYLY           
Sbjct: 12   KLLLISTGILGIALGLKISV-PLVLEFSVSQAPLWWSGFRSWLKPPYLYVVINGIIITIA 70

Query: 998  ASSRFTRTETETDSNFQ-HFRPLISARTPPRIE--TQHDMFVAASYXXXXXXXXXXXXXX 828
            ASSRF +   E D   Q   RP IS    P +E  T+      A                
Sbjct: 71   ASSRFNQNNGEKDQMEQMQPRPKISEDQQPIVEYDTKSGWGSDAVESSDFVYEENQRGEE 130

Query: 827  XXXXXXXXXXXXEIDEGALVREMDVPREQEV-------------VLPVRRKARGLSRFGP 687
                         +++     E  + + + +              L ++ K    SR G 
Sbjct: 131  VATRVSEEESNVAVEDDRDGNEFVISKSEWIPPSRTDSSEIPLDALLIQEKPAPSSRSGH 190

Query: 686  PKPPHATPKGKSEVTTEESINRQDQEVTLESMWNMIMEGREKPFDQSMKKSELLDDYTRK 507
             KP    P+G   +   +    +    TLE+ W MI EG+  P  + +KKS+  +++ R 
Sbjct: 191  RKPVKVNPEGGRALKAAKPKRHE----TLENTWKMITEGKSMPLSRHLKKSDTWENHGRD 246

Query: 506  VDDERPLNEPSVSTP------TNSQFPKTSLKGRATYLCESPVKSWILKKEPSLGQEELN 345
            ++ E   + P +         TN Q P   +         S   S  L+KEPSL Q+ELN
Sbjct: 247  INVEALTSSPLMKKSETFRDRTNYQLPPEQVS--------SFPASGKLRKEPSLSQDELN 298

Query: 344  RRADAFIQKFNEEMRMQRQQSLMQ 273
            RR +AFI+KFN+EMR+QRQ+SL Q
Sbjct: 299  RRVEAFIKKFNDEMRLQRQESLNQ 322


>ref|XP_002316652.1| predicted protein [Populus trichocarpa] gi|222859717|gb|EEE97264.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  116 bits (290), Expect = 1e-23
 Identities = 94/322 (29%), Positives = 142/322 (44%), Gaps = 20/322 (6%)
 Frame = -2

Query: 1178 KILLISSGVILLAMMMKLTIIPWLINFTMSELPIIWSFLVSLCKPPYLYXXXXXXXXXXX 999
            K++L+S+ V+ L++ +K+++ P + +F++++ P++WS ++S  KPPYLY           
Sbjct: 9    KVILLSTSVLFLSLCLKISV-PLVHDFSVNQAPLLWSSILSWLKPPYLYVIINCIIITIA 67

Query: 998  ASSRFTRTETETDSNFQHFRPLISARTPPRIETQHDMFVAASYXXXXXXXXXXXXXXXXX 819
            ASSRF  + +  +S   H +          I+ Q                          
Sbjct: 68   ASSRFHHSHSSANSTTTHDQIEKIPMDEAEIDYQDREEEREEAAHHEQVVIEDKGIVNAV 127

Query: 818  XXXXXXXXXEIDEGALVREMDVP-------REQEVVLPVR----RKARGLSRFGPPKPPH 672
                      +D+  L +   VP        E  ++LP       K    SRFG  K   
Sbjct: 128  AVLEDSKNETVDDFVLSKSTWVPPFKRIDSSENNLLLPDNLSPVEKPLVSSRFGHRKFVK 187

Query: 671  ATPKGKSEVTTEESINRQDQEVTLESMWNMIMEGREKPFDQSMKKSELLDDY-------- 516
            A+P+G   +     + +  +  TLE+ W  I EGR  P  + +KKSE   D         
Sbjct: 188  ASPEGGRALR----VAKPKRHETLENTWKTITEGRAMPITRHVKKSETFKDTWENHGSQF 243

Query: 515  -TRKVDDERPLNEPSVSTPTNSQFPKTSLKGRATYLCESPVKSWILKKEPSLGQEELNRR 339
             T  VD        +    TN Q P  +          S   S  L+KEPSL Q+ELNRR
Sbjct: 244  NTSVVDPHEVKKSTTFKDRTNYQLPLVN---------SSSPSSGKLRKEPSLSQDELNRR 294

Query: 338  ADAFIQKFNEEMRMQRQQSLMQ 273
             +AFI+KFNEEMR+QRQ+SL Q
Sbjct: 295  VEAFIKKFNEEMRLQRQESLNQ 316


>ref|XP_002273372.2| PREDICTED: uncharacterized protein LOC100244739 [Vitis vinifera]
          Length = 330

 Score =  115 bits (287), Expect = 3e-23
 Identities = 96/326 (29%), Positives = 151/326 (46%), Gaps = 24/326 (7%)
 Frame = -2

Query: 1178 KILLISSGVILLAMMMKLTIIPWLINFTMSELPIIWSFLVSLCKPPYLYXXXXXXXXXXX 999
            K+ LIS GV+ +A++++ +I P +  F +S +P++WS   S  KPPYLY           
Sbjct: 16   KVALISIGVVSMAVILRQSI-PVISEFAVSGVPVMWSSFRSWLKPPYLYVIINGIIITIA 74

Query: 998  ASSRFTRTETETDSNFQHFRPLISARTPP--RIETQHDMFVAASYXXXXXXXXXXXXXXX 825
            ASS+F R   +        RP  +A+ P   R E  ++M     +               
Sbjct: 75   ASSKFHRMNHQD-------RPETAAKDPEDERTEFTYEMKNPPEFVGLETPIVYEQREVT 127

Query: 824  XXXXXXXXXXXEIDEGALVREMDVPREQEVVLP----VRRKARGL--------------S 699
                        +++     E+ + R     LP    +RR++  +              S
Sbjct: 128  ISEVKNVADSPVVEDE---EELVISRSTTPPLPPSPLLRRESSEIPLECLLSTEKPLVSS 184

Query: 698  RFGPPKPPHATPKGKSEVTTEESINRQDQEVTLESMWNMIMEGREKPFDQSMKKSELLDD 519
            RFG  KP  A+P+          +++  +  TLE+ W MI +GR  P  + +KKS+  ++
Sbjct: 185  RFGHRKPIKASPEASGGKVLR--VSKPKRHETLENTWKMITDGRHMPLTRHLKKSDTWEN 242

Query: 518  YTRKV---DDERPLN-EPSVSTPTNSQFPKTSLKGRATYLCESPVKSWILKKEPSLGQEE 351
            + R +   +D  P     S +    +  P  SL         SP+ S  L+K+PSL Q+E
Sbjct: 243  HGRHIVVREDSSPQRVNKSETFKDRTNNPPPSLT--------SPLDSVKLRKDPSLSQDE 294

Query: 350  LNRRADAFIQKFNEEMRMQRQQSLMQ 273
            LNRR +AFI+KFNEEMR+QRQ+SL Q
Sbjct: 295  LNRRVEAFIKKFNEEMRLQRQESLNQ 320


Top