BLASTX nr result

ID: Lithospermum22_contig00036514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036514
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG66307.1| CCR4 associated factor 1-related protein [Capsicu...   129   2e-28
ref|XP_002874054.1| hypothetical protein ARALYDRAFT_489075 [Arab...   126   2e-27
ref|XP_002328114.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|NP_197617.1| putative CCR4-associated factor 1-11 [Arabidops...   125   5e-27
gb|ACQ77596.1| CCR4-NOT [Dimocarpus longan]                           124   6e-27

>gb|ABG66307.1| CCR4 associated factor 1-related protein [Capsicum annuum]
          Length = 266

 Score =  129 bits (325), Expect = 2e-28
 Identities = 67/103 (65%), Positives = 78/103 (75%), Gaps = 1/103 (0%)
 Frame = +2

Query: 44  IKIREVWNSNLMFELQLISNVIRDFSYISMDTEFPGVIFKADFKQNKFKNPNYLDDHYKL 223
           IKIREVW  NL  E +LIS VI  + YISMDTEFPGV+ K D ++   ++    +D YKL
Sbjct: 3   IKIREVWADNLESEFELISTVIDQYPYISMDTEFPGVVIKPDRRRLSLRS----EDQYKL 58

Query: 224 LKANVDSLNLIQLGLTLSDVDGNLPDFGGS-ERFIWQFNFCDF 349
           LKANVD LNLIQLGLTLSDVDGNLPDFG + + +IWQFNF DF
Sbjct: 59  LKANVDVLNLIQLGLTLSDVDGNLPDFGSNGDGYIWQFNFSDF 101


>ref|XP_002874054.1| hypothetical protein ARALYDRAFT_489075 [Arabidopsis lyrata subsp.
           lyrata] gi|297319891|gb|EFH50313.1| hypothetical protein
           ARALYDRAFT_489075 [Arabidopsis lyrata subsp. lyrata]
          Length = 274

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/103 (62%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
 Frame = +2

Query: 44  IKIREVWNSNLMFELQLISNVIRDFSYISMDTEFPGVIFKADFKQNKFKNPNYLDDHYKL 223
           I IR+VW  NL  E +LIS ++  + +ISMDTEFPGVIFKAD    +  NPNYL   Y L
Sbjct: 8   IVIRDVWADNLESEFELISGIVEAYPFISMDTEFPGVIFKADLAVLRLGNPNYL---YNL 64

Query: 224 LKANVDSLNLIQLGLTLSDVDGNLPDFG-GSERFIWQFNFCDF 349
           LK+NVD+L+LIQ+GLTLSD DGNLPD G  + RFIW+FNF DF
Sbjct: 65  LKSNVDALSLIQVGLTLSDADGNLPDLGVQNRRFIWEFNFRDF 107


>ref|XP_002328114.1| predicted protein [Populus trichocarpa] gi|222837629|gb|EEE75994.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/110 (57%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
 Frame = +2

Query: 35  AKPIKIREVWNSNLMFELQLISNVIRDFSYISMDTEFPGVIFKADFKQNKFKNPNYL--- 205
           +K I IREVW+ NL  E +LI ++I +F +ISMDTEFPGV+F+         N NY    
Sbjct: 4   SKEIVIREVWSCNLESEFELIRDLIDEFPFISMDTEFPGVVFRPPVDPTN--NRNYFRQL 61

Query: 206 --DDHYKLLKANVDSLNLIQLGLTLSDVDGNLPDFGGSERFIWQFNFCDF 349
              DHYK+LK+NVD+LNLIQ+GLTLSD +GNLPD G   RFIW+FNF DF
Sbjct: 62  KPSDHYKILKSNVDALNLIQVGLTLSDAEGNLPDLGTGNRFIWEFNFRDF 111


>ref|NP_197617.1| putative CCR4-associated factor 1-11 [Arabidopsis thaliana]
           gi|75334084|sp|Q9FMS6.1|CAF1K_ARATH RecName:
           Full=Probable CCR4-associated factor 1 homolog 11
           gi|9757805|dbj|BAB08323.1| CCR4-associated factor-like
           protein [Arabidopsis thaliana]
           gi|17381058|gb|AAL36341.1| putative CCR4-associated
           factor [Arabidopsis thaliana] gi|25054979|gb|AAN71961.1|
           putative CCR4-associated factor [Arabidopsis thaliana]
           gi|332005618|gb|AED93001.1| putative CCR4-associated
           factor 1-11 [Arabidopsis thaliana]
          Length = 278

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/104 (60%), Positives = 77/104 (74%), Gaps = 2/104 (1%)
 Frame = +2

Query: 44  IKIREVWNSNLMFELQLISNVIRDFSYISMDTEFPGVIFKADFKQNKFKNPNYLDDHYKL 223
           I IR+VW  NL  E  LI  ++ D+ +ISMDTEFPGVI+KAD    +  NPNYL   Y L
Sbjct: 12  IVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNYL---YNL 68

Query: 224 LKANVDSLNLIQLGLTLSDVDGNLPDFGG--SERFIWQFNFCDF 349
           LK+NVD+L+LIQ+GLTLSD DGNLPD GG  + R+IW+FNF DF
Sbjct: 69  LKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDF 112


>gb|ACQ77596.1| CCR4-NOT [Dimocarpus longan]
          Length = 199

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/102 (59%), Positives = 76/102 (74%)
 Frame = +2

Query: 44  IKIREVWNSNLMFELQLISNVIRDFSYISMDTEFPGVIFKADFKQNKFKNPNYLDDHYKL 223
           IKIREVW+ NL  E +LI  VI  + YISMDTEFPG+I+++    +  + P+   DHY+L
Sbjct: 11  IKIREVWDFNLESEFELIRQVIDHYPYISMDTEFPGIIYRSSKPYHSQRQPS---DHYEL 67

Query: 224 LKANVDSLNLIQLGLTLSDVDGNLPDFGGSERFIWQFNFCDF 349
           LK+NVD+LNLIQ+GLTLSD  GNLPD G   +FIWQFNF DF
Sbjct: 68  LKSNVDALNLIQVGLTLSDSSGNLPDLGTDNQFIWQFNFRDF 109


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