BLASTX nr result

ID: Lithospermum22_contig00036497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036497
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containi...   212   2e-53
emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]   212   2e-53
ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containi...   185   4e-45
ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat...   180   1e-43
ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumi...   180   1e-43

>ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  212 bits (540), Expect = 2e-53
 Identities = 94/137 (68%), Positives = 119/137 (86%)
 Frame = +3

Query: 3   DVNPGPEHYACMIDLVSRAGRLQEAKRFVDAMPIVPNASVWGALLGACLKYGDVYMGRDI 182
           D+NPGPEHYACM+DL+ RAG L EAKRF+++MP+ P  SVWGALLGAC KYG++ MGR+ 
Sbjct: 345 DMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREA 404

Query: 183 AKKLIKIEPHNPGNYVLLSNLCSRVRKLDEADEVRRLMGTNRVKKEPGCSWIDV*NMTYI 362
           A++L ++EP+NPGNYVLL+N+C+R  +L+EA+EVRRLMG N V+KEPGCSWIDV NMT++
Sbjct: 405 AERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFV 464

Query: 363 FTAHDRSHLQTPEIYKM 413
           FTAHDRSH  + EIYKM
Sbjct: 465 FTAHDRSHSSSDEIYKM 481


>emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  212 bits (540), Expect = 2e-53
 Identities = 94/137 (68%), Positives = 119/137 (86%)
 Frame = +3

Query: 3   DVNPGPEHYACMIDLVSRAGRLQEAKRFVDAMPIVPNASVWGALLGACLKYGDVYMGRDI 182
           D+NPGPEHYACM+DL+ RAG L EAKRF+++MP+ P  SVWGALLGAC KYG++ MGR+ 
Sbjct: 580 DMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREA 639

Query: 183 AKKLIKIEPHNPGNYVLLSNLCSRVRKLDEADEVRRLMGTNRVKKEPGCSWIDV*NMTYI 362
           A++L ++EP+NPGNYVLL+N+C+R  +L+EA+EVRRLMG N V+KEPGCSWIDV NMT++
Sbjct: 640 AERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFV 699

Query: 363 FTAHDRSHLQTPEIYKM 413
           FTAHDRSH  + EIYKM
Sbjct: 700 FTAHDRSHSSSDEIYKM 716


>ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  185 bits (469), Expect = 4e-45
 Identities = 85/137 (62%), Positives = 110/137 (80%)
 Frame = +3

Query: 3   DVNPGPEHYACMIDLVSRAGRLQEAKRFVDAMPIVPNASVWGALLGACLKYGDVYMGRDI 182
           ++ PG EHYACM+DL+ R GRL+EA RF+++MP  P++ VWGALLGAC K+ +V MGR++
Sbjct: 532 NIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGACGKHANVEMGREV 591

Query: 183 AKKLIKIEPHNPGNYVLLSNLCSRVRKLDEADEVRRLMGTNRVKKEPGCSWIDV*NMTYI 362
           A++L K+EP NPGNY+LLSN+  R   L+EADEVRRLMG N V+KE GCSWIDV N T++
Sbjct: 592 AERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFV 651

Query: 363 FTAHDRSHLQTPEIYKM 413
           F A+DRSH +T EIY M
Sbjct: 652 FNANDRSHSRTQEIYGM 668


>ref|XP_004163774.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 556

 Score =  180 bits (456), Expect = 1e-43
 Identities = 82/136 (60%), Positives = 106/136 (77%)
 Frame = +3

Query: 6   VNPGPEHYACMIDLVSRAGRLQEAKRFVDAMPIVPNASVWGALLGACLKYGDVYMGRDIA 185
           + PG EHYAC++DL+SRAG L  AKRF++ MPI P+ASVWGALL AC  + ++ MG+++A
Sbjct: 318 IYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVA 377

Query: 186 KKLIKIEPHNPGNYVLLSNLCSRVRKLDEADEVRRLMGTNRVKKEPGCSWIDV*NMTYIF 365
            KL  +EP NPGNYVLL N+ +R   L+EADEVRR M +  V+KEPGCSWID+ N TY+F
Sbjct: 378 LKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVF 437

Query: 366 TAHDRSHLQTPEIYKM 413
           T HD+SH +T EIY+M
Sbjct: 438 TVHDKSHEKTKEIYEM 453


>ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  180 bits (456), Expect = 1e-43
 Identities = 82/136 (60%), Positives = 106/136 (77%)
 Frame = +3

Query: 6   VNPGPEHYACMIDLVSRAGRLQEAKRFVDAMPIVPNASVWGALLGACLKYGDVYMGRDIA 185
           + PG EHYAC++DL+SRAG L  AKRF++ MPI P+ASVWGALL AC  + ++ MG+++A
Sbjct: 466 IYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVA 525

Query: 186 KKLIKIEPHNPGNYVLLSNLCSRVRKLDEADEVRRLMGTNRVKKEPGCSWIDV*NMTYIF 365
            KL  +EP NPGNYVLL N+ +R   L+EADEVRR M +  V+KEPGCSWID+ N TY+F
Sbjct: 526 LKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVF 585

Query: 366 TAHDRSHLQTPEIYKM 413
           T HD+SH +T EIY+M
Sbjct: 586 TVHDKSHEKTKEIYEM 601


Top