BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036489
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containi...   261   3e-68
emb|CBI19955.3| unnamed protein product [Vitis vinifera]              261   3e-68
gb|AER41656.1| CRR4 [Oryza rufipogon]                                 196   2e-48
gb|AER41630.1| CRR4 [Oryza nivara]                                    196   2e-48
gb|AER41600.1| CRR4 [Oryza glaberrima]                                196   2e-48

>ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 658

 Score =  261 bits (668), Expect = 3e-68
 Identities = 117/170 (68%), Positives = 143/170 (84%)
 Frame = -3

Query: 510 YVNGHMFDQALSVFHNMLVDGNCKPNQVTLISALSACSHLGAHDHGKWIDGYIKKNNVDL 331
           YV+ H FDQAL VFH+ML++G C+P+Q TLIS LSAC+HLG+ +HGKWI+ YIKKN + L
Sbjct: 275 YVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHL 334

Query: 330 SVPLGNGMIDMFAKCGDLPSAWEAFHKMPKKCIITWTTMISGLAVNGHCSKALELFYRMC 151
           S+PLGN +IDMFAKCGD+ +A E FH M K+CIITWTTM+SGLAVNG C +A+ LF +MC
Sbjct: 335 SIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMC 394

Query: 150 RDGLKPDDVIFIAVLTACVHGGLLEDGNRVFDLMVKHYEIKPRIEHYGCM 1
            +G KPDDVIFIAVL+AC HGGL+E+G RVFD MV+ + IKPRIEHYGCM
Sbjct: 395 LEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCM 444



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 32/124 (25%)
 Frame = -3

Query: 315 NGMIDMFAKCGDLPSAWEAFHKMPKKCIITWTTMISGLAVNG------------------ 190
           N MI  + + GD+ +A   F++MP+K +++WT MISG A NG                  
Sbjct: 207 NSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVV 266

Query: 189 -------------HCSKALELFYRMCRDG-LKPDDVIFIAVLTACVHGGLLEDGNRVFDL 52
                           +AL +F+ M  +G  +PD    I++L+AC H G LE G  +   
Sbjct: 267 SWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSY 326

Query: 51  MVKH 40
           + K+
Sbjct: 327 IKKN 330


>emb|CBI19955.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score =  261 bits (668), Expect = 3e-68
 Identities = 117/170 (68%), Positives = 143/170 (84%)
 Frame = -3

Query: 510 YVNGHMFDQALSVFHNMLVDGNCKPNQVTLISALSACSHLGAHDHGKWIDGYIKKNNVDL 331
           YV+ H FDQAL VFH+ML++G C+P+Q TLIS LSAC+HLG+ +HGKWI+ YIKKN + L
Sbjct: 211 YVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHL 270

Query: 330 SVPLGNGMIDMFAKCGDLPSAWEAFHKMPKKCIITWTTMISGLAVNGHCSKALELFYRMC 151
           S+PLGN +IDMFAKCGD+ +A E FH M K+CIITWTTM+SGLAVNG C +A+ LF +MC
Sbjct: 271 SIPLGNALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMC 330

Query: 150 RDGLKPDDVIFIAVLTACVHGGLLEDGNRVFDLMVKHYEIKPRIEHYGCM 1
            +G KPDDVIFIAVL+AC HGGL+E+G RVFD MV+ + IKPRIEHYGCM
Sbjct: 331 LEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCM 380



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 32/124 (25%)
 Frame = -3

Query: 315 NGMIDMFAKCGDLPSAWEAFHKMPKKCIITWTTMISGLAVNG------------------ 190
           N MI  + + GD+ +A   F++MP+K +++WT MISG A NG                  
Sbjct: 143 NSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVV 202

Query: 189 -------------HCSKALELFYRMCRDG-LKPDDVIFIAVLTACVHGGLLEDGNRVFDL 52
                           +AL +F+ M  +G  +PD    I++L+AC H G LE G  +   
Sbjct: 203 SWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSY 262

Query: 51  MVKH 40
           + K+
Sbjct: 263 IKKN 266


>gb|AER41656.1| CRR4 [Oryza rufipogon]
          Length = 752

 Score =  196 bits (497), Expect = 2e-48
 Identities = 87/170 (51%), Positives = 123/170 (72%)
 Frame = -3

Query: 510 YVNGHMFDQALSVFHNMLVDGNCKPNQVTLISALSACSHLGAHDHGKWIDGYIKKNNVDL 331
           Y +   +D+AL  F  M+++G  +P++ TL+S +SAC+ LG+ ++  WI  +I K+N+ L
Sbjct: 318 YNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHL 377

Query: 330 SVPLGNGMIDMFAKCGDLPSAWEAFHKMPKKCIITWTTMISGLAVNGHCSKALELFYRMC 151
           +V LGN +IDMFAKCGD+  A   F+KM  +CIITWTTMISG A NG C  AL ++  MC
Sbjct: 378 TVALGNALIDMFAKCGDVGRAQSIFYKMETRCIITWTTMISGFAFNGLCRDALLVYNNMC 437

Query: 150 RDGLKPDDVIFIAVLTACVHGGLLEDGNRVFDLMVKHYEIKPRIEHYGCM 1
           R+G++ DD +FIA L AC HGGLL++G  +F+ MV+ Y I+PR+EHYGCM
Sbjct: 438 REGVQLDDTVFIAALAACAHGGLLQEGWSIFNEMVERYNIQPRMEHYGCM 487



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
 Frame = -3

Query: 309 MIDMFAKCGDLPSAWEAFHKMPKKCIITWTTMISGLAVNGHCSKALELFYRMCRDG-LKP 133
           M+  +AK GDL +A E F  MP K +++W  MI+G   N    +AL  F  M  +G  +P
Sbjct: 283 MVSAYAKIGDLDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRP 342

Query: 132 DDVIFIAVLTACVHGGLLEDGNRVFDLMVK 43
           D+   ++V++AC   G +E  N +   + K
Sbjct: 343 DEATLVSVVSACAQLGSVEYCNWISSFIGK 372


>gb|AER41630.1| CRR4 [Oryza nivara]
          Length = 748

 Score =  196 bits (497), Expect = 2e-48
 Identities = 87/170 (51%), Positives = 123/170 (72%)
 Frame = -3

Query: 510 YVNGHMFDQALSVFHNMLVDGNCKPNQVTLISALSACSHLGAHDHGKWIDGYIKKNNVDL 331
           Y +   +D+AL  F  M+++G  +P++ TL+S +SAC+ LG+ ++  WI  +I K+N+ L
Sbjct: 314 YNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHL 373

Query: 330 SVPLGNGMIDMFAKCGDLPSAWEAFHKMPKKCIITWTTMISGLAVNGHCSKALELFYRMC 151
           +V LGN +IDMFAKCGD+  A   F+KM  +CIITWTTMISG A NG C  AL ++  MC
Sbjct: 374 TVALGNALIDMFAKCGDVGRAQSIFYKMETRCIITWTTMISGFAFNGLCRDALLVYNNMC 433

Query: 150 RDGLKPDDVIFIAVLTACVHGGLLEDGNRVFDLMVKHYEIKPRIEHYGCM 1
           R+G++ DD +FIA L AC HGGLL++G  +F+ MV+ Y I+PR+EHYGCM
Sbjct: 434 REGVQLDDTVFIAALAACAHGGLLQEGWSIFNEMVERYNIQPRMEHYGCM 483



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
 Frame = -3

Query: 309 MIDMFAKCGDLPSAWEAFHKMPKKCIITWTTMISGLAVNGHCSKALELFYRMCRDG-LKP 133
           M+  +AK GDL +A E F  MP K +++W  MI+G   N    +AL  F  M  +G  +P
Sbjct: 279 MVSAYAKIGDLDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRP 338

Query: 132 DDVIFIAVLTACVHGGLLEDGNRVFDLMVK 43
           D+   ++V++AC   G +E  N +   + K
Sbjct: 339 DEATLVSVVSACAQLGSVEYCNWISSFIGK 368


>gb|AER41600.1| CRR4 [Oryza glaberrima]
          Length = 540

 Score =  196 bits (497), Expect = 2e-48
 Identities = 87/170 (51%), Positives = 123/170 (72%)
 Frame = -3

Query: 510 YVNGHMFDQALSVFHNMLVDGNCKPNQVTLISALSACSHLGAHDHGKWIDGYIKKNNVDL 331
           Y +   +D+AL  F  M+++G  +P++ TL+S +SAC+ LG+ ++  WI  +I K+N+ L
Sbjct: 217 YNHNSRYDEALRTFQLMMLEGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIGKSNIHL 276

Query: 330 SVPLGNGMIDMFAKCGDLPSAWEAFHKMPKKCIITWTTMISGLAVNGHCSKALELFYRMC 151
           +V LGN +IDMFAKCGD+  A   F+KM  +CIITWTTMISG A NG C  AL ++  MC
Sbjct: 277 TVALGNALIDMFAKCGDVGRAQSIFYKMETRCIITWTTMISGFAFNGLCRDALLVYNNMC 336

Query: 150 RDGLKPDDVIFIAVLTACVHGGLLEDGNRVFDLMVKHYEIKPRIEHYGCM 1
           R+G++ DD +FIA L AC HGGLL++G  +F+ MV+ Y I+PR+EHYGCM
Sbjct: 337 REGVQLDDTVFIAALAACAHGGLLQEGWSIFNEMVERYNIQPRMEHYGCM 386



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
 Frame = -3

Query: 309 MIDMFAKCGDLPSAWEAFHKMPKKCIITWTTMISGLAVNGHCSKALELFYRMCRDG-LKP 133
           M+  +AK GDL +A E F  MP K +++W  MI+G   N    +AL  F  M  +G  +P
Sbjct: 182 MVSAYAKIGDLDTANELFDHMPVKNLVSWNAMITGYNHNSRYDEALRTFQLMMLEGRFRP 241

Query: 132 DDVIFIAVLTACVHGGLLEDGNRVFDLMVK 43
           D+   ++V++AC   G +E  N +   + K
Sbjct: 242 DEATLVSVVSACAQLGSVEYCNWISSFIGK 271



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/89 (34%), Positives = 49/89 (55%)
 Frame = -3

Query: 315 NGMIDMFAKCGDLPSAWEAFHKMPKKCIITWTTMISGLAVNGHCSKALELFYRMCRDGLK 136
           N ++  FA+ GD+ +AW  F +MP +  ++W  MISG A +G    A  +F RM     +
Sbjct: 118 NTVVAGFARMGDMVTAWAVFDRMPSRNAVSWNLMISGYATSGDVEAARSVFDRMD----Q 173

Query: 135 PDDVIFIAVLTACVHGGLLEDGNRVFDLM 49
            D V + A+++A    G L+  N +FD M
Sbjct: 174 KDVVSWTAMVSAYAKIGDLDTANELFDHM 202