BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036462
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi...   162   2e-38
ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containi...   149   2e-34
ref|XP_002514422.1| pentatricopeptide repeat-containing protein,...   135   3e-30
ref|XP_002525881.1| pentatricopeptide repeat-containing protein,...   129   3e-28
ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28

>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  162 bits (411), Expect = 2e-38
 Identities = 75/140 (53%), Positives = 106/140 (75%)
 Frame = +2

Query: 2   GLCSAGHVEEAETFVNCLERKTLDDYAALVNGYCESNNTKSAYKLFWKLFTQGLLINQYS 181
           GLC AG V+EAE F+N LE K L++Y+A+V+GYC++N T+ AY+LF +L  QG+L+ + S
Sbjct: 516 GLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKS 575

Query: 182 CLKLLSNLCQEGQYDEALKICEVCQSSGDDPCKLMYGKLLAGLCNAGNMMKARLTFDNLV 361
           C KLLS+LC EG+YD+AL + E   +   +P ++MYGKL+   C  G+M +A+L FD LV
Sbjct: 576 CFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLV 635

Query: 362 CRGLTPDVVIYTIMINGYCK 421
            RG+TPDV+ YT+MINGYC+
Sbjct: 636 ERGITPDVITYTMMINGYCR 655



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
 Frame = +2

Query: 2   GLCSAGHVEEAE-TFVNCLERKTLDD---YAALVNGYCESNNTKSAYKLFWKLFTQGLLI 169
           G CS   ++EAE  F++ +      D   Y AL++ YC++ N   A  L   + + G+  
Sbjct: 306 GFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKT 365

Query: 170 NQYSCLKLLSNLCQEGQYDEALKICEVCQSSGDDPCKLMYGKLLAGLCNAGNMMKARLTF 349
           N      +L  LC+ G   E +   +  + SG    +++Y  ++  LC  G + +A    
Sbjct: 366 NCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELL 425

Query: 350 DNLVCRGLTPDVVIYTIMINGYC 418
           + +  R ++ DVV YT +I GYC
Sbjct: 426 NEMKGRRMSLDVVHYTTLIAGYC 448


>ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/140 (51%), Positives = 94/140 (67%)
 Frame = +2

Query: 2   GLCSAGHVEEAETFVNCLERKTLDDYAALVNGYCESNNTKSAYKLFWKLFTQGLLINQYS 181
           GLCS G V EAE + N LE K ++ Y+A+VNGYCE++  K +Y++F KL  QG +  + S
Sbjct: 519 GLCSGGKVLEAEVYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKAS 578

Query: 182 CLKLLSNLCQEGQYDEALKICEVCQSSGDDPCKLMYGKLLAGLCNAGNMMKARLTFDNLV 361
           C KLLS LC  G  ++A+K+ +    S  +P K+MY K+LA LC AG+M  AR  FD  V
Sbjct: 579 CFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDVFV 638

Query: 362 CRGLTPDVVIYTIMINGYCK 421
            RG TPDVV YTIMIN YC+
Sbjct: 639 HRGFTPDVVTYTIMINSYCR 658



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 4/143 (2%)
 Frame = +2

Query: 5   LCSAGHVEEAETFVNCLERKTLD----DYAALVNGYCESNNTKSAYKLFWKLFTQGLLIN 172
           LC  G VE+A   V  ++ K L      Y  L+NGYC   +  +A+ +F ++  +GL  +
Sbjct: 415 LCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPD 474

Query: 173 QYSCLKLLSNLCQEGQYDEALKICEVCQSSGDDPCKLMYGKLLAGLCNAGNMMKARLTFD 352
             +   L + L + G   E +K+ +  +S G  P    +  ++ GLC+ G +++A + F+
Sbjct: 475 IVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLEAEVYFN 534

Query: 353 NLVCRGLTPDVVIYTIMINGYCK 421
           +L  +    ++ IY+ M+NGYC+
Sbjct: 535 SLEDK----NIEIYSAMVNGYCE 553



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/116 (25%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
 Frame = +2

Query: 77  YAALVNGYCESNNTKSAYKLFWKLFTQGLLINQYSCLKLLSNLCQEGQYDEALKICEVCQ 256
           YA ++   C+  + K    +F ++   G++ + Y     +  LC   + D   ++ +  +
Sbjct: 233 YAIVIKALCKKGDLKQPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFR 292

Query: 257 SSGDDPCKLM-YGKLLAGLCNAGNMMKARLTFDNLVCRGLTPDVVIYTIMINGYCK 421
             G+ P ++  Y  ++ G CN   + +A+  FD++  +G+ PDV +Y+ +I+GYCK
Sbjct: 293 K-GNAPLEVYAYTAVVRGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCK 347


>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 809

 Score =  135 bits (341), Expect = 3e-30
 Identities = 65/140 (46%), Positives = 92/140 (65%)
 Frame = +2

Query: 2   GLCSAGHVEEAETFVNCLERKTLDDYAALVNGYCESNNTKSAYKLFWKLFTQGLLINQYS 181
           GLC  G V++A+ F + LE K L++Y+A+VNGYCE+N+   A+ L  +L  QG ++ + S
Sbjct: 508 GLCIGGKVDDAQAFFDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKAS 567

Query: 182 CLKLLSNLCQEGQYDEALKICEVCQSSGDDPCKLMYGKLLAGLCNAGNMMKARLTFDNLV 361
             KLL NLC EG  ++AL + E   +   +P  +MY K++  L  AG M KA+  F+ LV
Sbjct: 568 FFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLV 627

Query: 362 CRGLTPDVVIYTIMINGYCK 421
            RGL PDV+ YTIMINGYC+
Sbjct: 628 DRGLAPDVITYTIMINGYCR 647



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
 Frame = +2

Query: 5    LCSAGHVEEAETFVNCLERKTLDD----YAALVNGYCESNNTKSAYKLFWKLFTQGL--- 163
            L  AG +E+A+   N L  + L      Y  ++NGYC  N  K A+ +   +  +G+   
Sbjct: 610  LFQAGEMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPD 669

Query: 164  ------LINQYSCLKLLSNLC-------QEGQYDEALKICEVCQSSGDDPCKLMYGKLLA 304
                  L+N  S + L S+         +E   D +    E+ +     P  + Y  L+ 
Sbjct: 670  VITYTVLLNNCSKIDLRSSSSSLDAMKSKENMMDPSALWSEM-KDMDIKPDVICYTVLID 728

Query: 305  GLCNAGNMMKARLTFDNLVCRGLTPDVVIYTIMINGYC 418
              C   N+  A   F+ ++ RGL PD V YT +++GYC
Sbjct: 729  KHCKTNNIQDAINLFNEMIDRGLAPDTVTYTALLSGYC 766



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/114 (23%), Positives = 49/114 (42%)
 Frame = +2

Query: 77  YAALVNGYCESNNTKSAYKLFWKLFTQGLLINQYSCLKLLSNLCQEGQYDEALKICEVCQ 256
           Y   + G+C   N   A  +F  +   G+  N +S    +  LC  G+ D   K+ +   
Sbjct: 222 YTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVI 281

Query: 257 SSGDDPCKLMYGKLLAGLCNAGNMMKARLTFDNLVCRGLTPDVVIYTIMINGYC 418
           ++        Y  ++ G C+   + +A      +  +G  PDV +Y  +I+GYC
Sbjct: 282 NAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYC 335


>ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534795|gb|EEF36485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 913

 Score =  129 bits (324), Expect = 3e-28
 Identities = 65/142 (45%), Positives = 89/142 (62%), Gaps = 3/142 (2%)
 Frame = +2

Query: 5   LCSAGHVEEAETFVNCLERKTLDDYAALVNGYCESNNTKSAYKLFWKLFTQGLLINQYSC 184
           LC  G V+EAE   N +E K+LD+Y A++NGYC++N+T  A KLF++L  +G  + +  C
Sbjct: 523 LCMGGKVKEAEAVFNSIEDKSLDNYFAMINGYCKANHTAGAAKLFFRLSVKG-HVKRSCC 581

Query: 185 LKLLSNLCQEGQYDEALKICEVCQSSGDDPCKLMYGKLLAGLCNAG---NMMKARLTFDN 355
             LL NLC+EG  D  L + E   +   +P K +YGKL   LC AG    M KA+  FD 
Sbjct: 582 YNLLKNLCEEGDNDGILMLLETMLNLNVEPSKFIYGKLFTSLCRAGGAAGMRKAQSVFDM 641

Query: 356 LVCRGLTPDVVIYTIMINGYCK 421
           L+ RG TPD++ YTIMI  YC+
Sbjct: 642 LLKRGWTPDLIAYTIMITSYCR 663



 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
 Frame = +2

Query: 5   LCSAGHVEEAETFVNCLERKTLD----DYAALVNGYCESNNTKSAYKLFWKLFTQGLLIN 172
           LC  G +EEA T ++ ++ K ++     Y  L+NGYC   N   A+K+F ++   G+ I+
Sbjct: 418 LCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKVFEEMRENGIEID 477

Query: 173 QYSCLKLLSNLCQEGQYDEALKICEVCQSSGDDPCKLMYGKLLAGLCNAGNMMKARLTFD 352
             +   L+S  C+ G   EAL + +  Q+    P  + Y  ++  LC  G + +A   F+
Sbjct: 478 VVTYDVLVSGFCRNGLATEALNLLDYMQTQKLKPNSITYNVVVESLCMGGKVKEAEAVFN 537

Query: 353 NLVCRGLTPDVVIYTIMINGYCK 421
           ++  + L      Y  MINGYCK
Sbjct: 538 SIEDKSLDN----YFAMINGYCK 556



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
 Frame = +2

Query: 8   CSAGHVEEAETFVNCLERKTLDDYAALVNGY----CESNNTKSAYKLFWKLFTQGLLINQ 175
           C AG++ +A  F+N +  K +     +V       CE          F +  + GL ++ 
Sbjct: 349 CKAGNLLKAYAFLNEMMSKGVKVNCVIVGSILHCLCELGMHSEVVDQFNQFKSLGLFLDG 408

Query: 176 YSCLKLLSNLCQEGQYDEALKICEVCQSSGDDPCKLMYGKLLAGLCNAGNMMKARLTFDN 355
            S   ++  LC+ G+ +EA+ + +  +    +   + Y  L+ G C  GN++ A   F+ 
Sbjct: 409 VSYNNVVDALCKLGKLEEAITLLDEMKMKQINMDVMHYTTLINGYCCQGNVVDAFKVFEE 468

Query: 356 LVCRGLTPDVVIYTIMINGYCK 421
           +   G+  DVV Y ++++G+C+
Sbjct: 469 MRENGIEIDVVTYDVLVSGFCR 490


>ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Cucumis sativus]
          Length = 795

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/139 (44%), Positives = 90/139 (64%)
 Frame = +2

Query: 5   LCSAGHVEEAETFVNCLERKTLDDYAALVNGYCESNNTKSAYKLFWKLFTQGLLINQYSC 184
           LC  G V+EA    N LE KT+D+YAA++NGYC +++TKSAYKLF  L  +G+ I + S 
Sbjct: 506 LCIGGKVKEATEIFNSLEVKTVDNYAAMINGYCAASDTKSAYKLFVNLSKEGIFIRRSSL 565

Query: 185 LKLLSNLCQEGQYDEALKICEVCQSSGDDPCKLMYGKLLAGLCNAGNMMKARLTFDNLVC 364
           ++L+S LC E     A+++ +       +  +++Y K++A LC   NM  A+  FD LV 
Sbjct: 566 VRLVSRLCMENSSFRAIEVMKQLPVMNVEAKEIVYNKVIASLCRVKNMKMAQCLFDCLVR 625

Query: 365 RGLTPDVVIYTIMINGYCK 421
            GL PD++ YT+MINGYCK
Sbjct: 626 AGLIPDLITYTMMINGYCK 644