BLASTX nr result

ID: Lithospermum22_contig00036454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036454
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containi...   194   2e-47
ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containi...   177   2e-42
emb|CBI24389.3| unnamed protein product [Vitis vinifera]              177   2e-42
ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containi...   175   1e-41
ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containi...   175   1e-41

>ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
            mitochondrial-like [Glycine max]
          Length = 713

 Score =  194 bits (493), Expect = 2e-47
 Identities = 97/183 (53%), Positives = 129/183 (70%), Gaps = 8/183 (4%)
 Frame = +1

Query: 1    GESSQALELFDIMLADSRVQPNYVTFLSVLSACSHAGLVEKGREVFQSMERHYFMKPRME 180
            G   +AL ++  M ++   +PN+VTFL+VLSAC+HAGLV++G  +F +M+ HY ++P  +
Sbjct: 509  GFGDEALGIYKKMQSEGH-EPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEAD 567

Query: 181  HYACMVXXXXXXXXXXXXMNLIHSMPVKPHSGIWGALLAASMTHLRPDLAKLAAQHISEL 360
            HYACMV            ++LI SMP KPHSG+WGA+L AS THLR DLAKLAAQ I++L
Sbjct: 568  HYACMVDILGRAGLLDEAIDLIRSMPFKPHSGVWGAILGASKTHLRLDLAKLAAQRITDL 627

Query: 361  EPDSAAPYVVLSDIYSFTGKKKDEEQVRMAKNVKGIKKSPGCSWI--------LFSGEGS 516
            EP +A PYVVLS++YS  GKK D + V+MAKN+KGIKKSPGCSWI          +G+ S
Sbjct: 628  EPKNATPYVVLSNMYSAAGKKIDGDLVKMAKNLKGIKKSPGCSWITMKNKVHLFLAGDQS 687

Query: 517  HAN 525
            H +
Sbjct: 688  HGS 690


>ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
            mitochondrial [Vitis vinifera]
          Length = 744

 Score =  177 bits (450), Expect = 2e-42
 Identities = 90/166 (54%), Positives = 117/166 (70%)
 Frame = +1

Query: 1    GESSQALELFDIMLADSRVQPNYVTFLSVLSACSHAGLVEKGREVFQSMERHYFMKPRME 180
            G   +ALELF  ML + + +PN +TFL VLSAC+H GL+E+G   F+SM+  Y ++P   
Sbjct: 579  GFGEEALELFHKMLNEGQ-KPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPH 637

Query: 181  HYACMVXXXXXXXXXXXXMNLIHSMPVKPHSGIWGALLAASMTHLRPDLAKLAAQHISEL 360
            HYAC+V            ++LI SMP +PHSG+WGALL AS  HLR D+AKLAAQ I +L
Sbjct: 638  HYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKL 697

Query: 361  EPDSAAPYVVLSDIYSFTGKKKDEEQVRMAKNVKGIKKSPGCSWIL 498
            EPD+AAPY VLS +YS  G+ +D EQVRMA+ +KG+KKS G SWI+
Sbjct: 698  EPDNAAPYAVLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWII 743


>emb|CBI24389.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  177 bits (450), Expect = 2e-42
 Identities = 90/166 (54%), Positives = 117/166 (70%)
 Frame = +1

Query: 1   GESSQALELFDIMLADSRVQPNYVTFLSVLSACSHAGLVEKGREVFQSMERHYFMKPRME 180
           G   +ALELF  ML + + +PN +TFL VLSAC+H GL+E+G   F+SM+  Y ++P   
Sbjct: 500 GFGEEALELFHKMLNEGQ-KPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPH 558

Query: 181 HYACMVXXXXXXXXXXXXMNLIHSMPVKPHSGIWGALLAASMTHLRPDLAKLAAQHISEL 360
           HYAC+V            ++LI SMP +PHSG+WGALL AS  HLR D+AKLAAQ I +L
Sbjct: 559 HYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKL 618

Query: 361 EPDSAAPYVVLSDIYSFTGKKKDEEQVRMAKNVKGIKKSPGCSWIL 498
           EPD+AAPY VLS +YS  G+ +D EQVRMA+ +KG+KKS G SWI+
Sbjct: 619 EPDNAAPYAVLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWII 664


>ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
            mitochondrial-like, partial [Cucumis sativus]
          Length = 719

 Score =  175 bits (444), Expect = 1e-41
 Identities = 85/170 (50%), Positives = 115/170 (67%)
 Frame = +1

Query: 1    GESSQALELFDIMLADSRVQPNYVTFLSVLSACSHAGLVEKGREVFQSMERHYFMKPRME 180
            G   +ALE+F  M  D  V PN++TFL VLSAC H GLVE+GR  F  M   Y ++P  +
Sbjct: 517  GLGKEALEIFTKMQDDYLV-PNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPD 575

Query: 181  HYACMVXXXXXXXXXXXXMNLIHSMPVKPHSGIWGALLAASMTHLRPDLAKLAAQHISEL 360
            HYACMV            ++L+ SMP  PH G+WGA+L AS THLR D+A+LAAQ++ EL
Sbjct: 576  HYACMVDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFEL 635

Query: 361  EPDSAAPYVVLSDIYSFTGKKKDEEQVRMAKNVKGIKKSPGCSWILFSGE 510
            EP+SA PYV+LS+++S +G ++  E +R+ K  +G+KKSPGCSWI+   E
Sbjct: 636  EPNSATPYVILSNLHSISGDERKHELIRLMKKSRGLKKSPGCSWIILKDE 685


>ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
            mitochondrial-like [Cucumis sativus]
          Length = 711

 Score =  175 bits (444), Expect = 1e-41
 Identities = 85/170 (50%), Positives = 115/170 (67%)
 Frame = +1

Query: 1    GESSQALELFDIMLADSRVQPNYVTFLSVLSACSHAGLVEKGREVFQSMERHYFMKPRME 180
            G   +ALE+F  M  D  V PN++TFL VLSAC H GLVE+GR  F  M   Y ++P  +
Sbjct: 509  GLGKEALEIFTKMQDDYLV-PNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPD 567

Query: 181  HYACMVXXXXXXXXXXXXMNLIHSMPVKPHSGIWGALLAASMTHLRPDLAKLAAQHISEL 360
            HYACMV            ++L+ SMP  PH G+WGA+L AS THLR D+A+LAAQ++ EL
Sbjct: 568  HYACMVDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFEL 627

Query: 361  EPDSAAPYVVLSDIYSFTGKKKDEEQVRMAKNVKGIKKSPGCSWILFSGE 510
            EP+SA PYV+LS+++S +G ++  E +R+ K  +G+KKSPGCSWI+   E
Sbjct: 628  EPNSATPYVILSNLHSISGDERKHELIRLMKKSRGLKKSPGCSWIILKDE 677


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