BLASTX nr result

ID: Lithospermum22_contig00036443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036443
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509838.1| zinc finger protein, putative [Ricinus commu...   191   9e-47
ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   178   8e-43
ref|XP_002304513.1| predicted protein [Populus trichocarpa] gi|2...   175   9e-42
ref|XP_002298018.1| predicted protein [Populus trichocarpa] gi|2...   174   1e-41
ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   173   3e-41

>ref|XP_002509838.1| zinc finger protein, putative [Ricinus communis]
           gi|223549737|gb|EEF51225.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 164

 Score =  191 bits (486), Expect = 9e-47
 Identities = 88/158 (55%), Positives = 110/158 (69%), Gaps = 2/158 (1%)
 Frame = -1

Query: 666 MGFPVGYSDXXXXXXXXXXXXXXXXLKKFIYIFLNFVGFGDFLEPEISIQAEPSS--DSY 493
           MGFPVGY++                ++K I     ++G  DFLEP+IS    PS   + Y
Sbjct: 1   MGFPVGYTELLLPKLLIHTLSILGFIRKLINTLFRYLGLPDFLEPDISWPETPSRVPEFY 60

Query: 492 SIGAVLMREFLPVAKFSELIDPPESCAVCLYEFDLDDQVRRLTNCRHIFHKCCLDRWLDH 313
           S  AVL+RE LPV KFS+L+DPP+SCAVCLYEF+  D++RRLTNCRHIFHK CLDRW+ +
Sbjct: 61  SASAVLIREILPVVKFSDLVDPPDSCAVCLYEFEDHDEIRRLTNCRHIFHKACLDRWVGY 120

Query: 312 YQKTCPLCRMPFVPKDMQQSFNERIWMTSGISDLYGDH 199
            QKTCPLCR P +P DMQ++FNER+W  SGI D YGD+
Sbjct: 121 DQKTCPLCRTPVIPDDMQEAFNERLWAASGIPDFYGDY 158


>ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Vitis vinifera]
          Length = 168

 Score =  178 bits (452), Expect = 8e-43
 Identities = 85/164 (51%), Positives = 110/164 (67%), Gaps = 8/164 (4%)
 Frame = -1

Query: 666 MGFPVGYSDXXXXXXXXXXXXXXXXLKKFIYIFLNFVGFGDFLEPEISIQAEPSS---DS 496
           MGFPVGY++                ++K I  F  F+G  DFLEP+I +  E S+   + 
Sbjct: 1   MGFPVGYTELLLPKLLLHTLSLLGFIRKLISYFFRFLGLTDFLEPDI-VWTEGSTQVPEF 59

Query: 495 YSIGAVLMREFLPVAKFSELI-----DPPESCAVCLYEFDLDDQVRRLTNCRHIFHKCCL 331
            S+ AVL+RE LPV KF EL+     DPP+ CAVCLYEF+  +++RRLTNCRHIFH+ CL
Sbjct: 60  QSVSAVLIREILPVMKFEELVGAGAGDPPDQCAVCLYEFEGQEEIRRLTNCRHIFHRSCL 119

Query: 330 DRWLDHYQKTCPLCRMPFVPKDMQQSFNERIWMTSGISDLYGDH 199
           DRW+D  QKTCPLCR PF+P DMQ++FNER+W  S + D YGD+
Sbjct: 120 DRWMDCDQKTCPLCRTPFIPDDMQEAFNERLWAASALPDFYGDY 163


>ref|XP_002304513.1| predicted protein [Populus trichocarpa] gi|222841945|gb|EEE79492.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  175 bits (443), Expect = 9e-42
 Identities = 84/166 (50%), Positives = 107/166 (64%), Gaps = 10/166 (6%)
 Frame = -1

Query: 666 MGFPVGYSDXXXXXXXXXXXXXXXXLKKFIYIFLNFVGFGDFLEPEISIQAE-------- 511
           MGFPVGYS+                ++K I    + +G  DFLEP IS  +         
Sbjct: 1   MGFPVGYSEIVLPKLLLHTLSFLGFIRKLINTLFHCIGLPDFLEPGISSSSSTENTPPFR 60

Query: 510 -PSSDSYSIGAVLMREFLPVAKFSELIDPP-ESCAVCLYEFDLDDQVRRLTNCRHIFHKC 337
            P   S+S+ A+L+RE LPV KFSEL+DP  +SCAVCLYEF+  D++RRL NCRHIFHKC
Sbjct: 61  VPDFHSHSVSALLIREILPVVKFSELVDPSADSCAVCLYEFEESDEIRRLANCRHIFHKC 120

Query: 336 CLDRWLDHYQKTCPLCRMPFVPKDMQQSFNERIWMTSGISDLYGDH 199
           CLDRW+ + Q TCPLCR   +P DMQ+SFNER+W  S I+D YG++
Sbjct: 121 CLDRWMGYDQITCPLCRTHVIPDDMQESFNERLWAASAITDFYGEY 166


>ref|XP_002298018.1| predicted protein [Populus trichocarpa] gi|222845276|gb|EEE82823.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  174 bits (442), Expect = 1e-41
 Identities = 83/165 (50%), Positives = 105/165 (63%), Gaps = 9/165 (5%)
 Frame = -1

Query: 666 MGFPVGYSDXXXXXXXXXXXXXXXXLKKFIYIFLNFVGFGDFLEPEISIQAE-------- 511
           MGFPVGYS+                 +K I    +++G  DFLEP  S  +         
Sbjct: 1   MGFPVGYSELLLPKLLLHALSVLGFFRKLINTLFHYLGLPDFLEPNTSSSSTNNIPPFGV 60

Query: 510 PSSDSYSIGAVLMREFLPVAKFSELIDPP-ESCAVCLYEFDLDDQVRRLTNCRHIFHKCC 334
           P   ++S+ A+L+RE LPV KFSEL+DP  + CAVCLYEF   D++RRL NCRHIFHKCC
Sbjct: 61  PEFHNHSVSALLIREILPVVKFSELVDPSADCCAVCLYEFKEVDEIRRLANCRHIFHKCC 120

Query: 333 LDRWLDHYQKTCPLCRMPFVPKDMQQSFNERIWMTSGISDLYGDH 199
           LDRW+ + Q TCPLCR P +P DMQ+SFNER+W  SGI D YG++
Sbjct: 121 LDRWMGYDQITCPLCRTPVIPDDMQESFNERLWAASGIPDFYGEY 165


>ref|XP_002278353.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 167

 Score =  173 bits (439), Expect = 3e-41
 Identities = 79/165 (47%), Positives = 110/165 (66%), Gaps = 5/165 (3%)
 Frame = -1

Query: 666 MGFPVGYSDXXXXXXXXXXXXXXXXLKKFIYIFLNFVGFGDFLEPEIS-IQAEPSSDSYS 490
           MGFPVGY++                ++K I+   +F+G  DFLE ++S  + +     Y 
Sbjct: 1   MGFPVGYTEVFLPKLFLHTLSFLGFIRKLIFSLFHFLGLSDFLETDVSWSETQAQVPEYP 60

Query: 489 -IGAVLMREFLPVAKFSELI---DPPESCAVCLYEFDLDDQVRRLTNCRHIFHKCCLDRW 322
            + AVL+RE LPV KF E +   D PESCAVCLY+F++ +++RRLTNC+HIFH+ CLDRW
Sbjct: 61  PVSAVLIREILPVMKFGEAVCGGDAPESCAVCLYDFEVGEEIRRLTNCKHIFHRSCLDRW 120

Query: 321 LDHYQKTCPLCRMPFVPKDMQQSFNERIWMTSGISDLYGDHPIIT 187
           +DH QKTCPLCR PFVP +MQ  FN+R+W  SGI+D Y ++  ++
Sbjct: 121 MDHDQKTCPLCRTPFVPDEMQDEFNQRLWAASGITDFYSEYGTVS 165


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