BLASTX nr result

ID: Lithospermum22_contig00036393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00036393
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319229.1| predicted protein [Populus trichocarpa] gi|2...   207   9e-52
ref|XP_002524006.1| ring finger protein, putative [Ricinus commu...   204   5e-51
ref|XP_002884394.1| zinc finger family protein [Arabidopsis lyra...   192   2e-47
ref|XP_002266511.1| PREDICTED: RING-H2 finger protein ATL51 [Vit...   191   5e-47
ref|XP_002325888.1| predicted protein [Populus trichocarpa] gi|2...   184   7e-45

>ref|XP_002319229.1| predicted protein [Populus trichocarpa] gi|222857605|gb|EEE95152.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  207 bits (526), Expect = 9e-52
 Identities = 99/157 (63%), Positives = 121/157 (77%), Gaps = 6/157 (3%)
 Frame = +3

Query: 36  TVGNQNPWAPYESYRRECSQGICSVYCPQWCYVIYPPPP-FDIGNDDDDGGSTFSPLIIA 212
           T GNQNPWAPY +YR +CSQGICS+YCPQ CY+I+PPPP F +G  DDD  +  SPLIIA
Sbjct: 4   TTGNQNPWAPYSTYR-DCSQGICSIYCPQRCYIIFPPPPPFTLG--DDDSNTDLSPLIIA 60

Query: 213 IIGVLVSAFLLVCYYTIITKYCRRRNNSITSIANRDVTNHDQ-----WQDVAQSGLDDKI 377
           +IG+L SAF+LV YYT+I+KYCRRR     +    +  NHDQ     WQ +   GLD+ +
Sbjct: 61  VIGILASAFILVTYYTLISKYCRRRGQGDGATDLNE--NHDQMASEAWQGIPAGGLDEAL 118

Query: 378 IKSITVCKYQKGDGLIEGTECAVCLSEFQENENLRLL 488
           +KSITVCKY+KGDG +EGTEC+VCLSEFQENE+LRLL
Sbjct: 119 VKSITVCKYKKGDGFVEGTECSVCLSEFQENESLRLL 155


>ref|XP_002524006.1| ring finger protein, putative [Ricinus communis]
           gi|223536733|gb|EEF38374.1| ring finger protein,
           putative [Ricinus communis]
          Length = 323

 Score =  204 bits (520), Expect = 5e-51
 Identities = 96/154 (62%), Positives = 123/154 (79%), Gaps = 3/154 (1%)
 Frame = +3

Query: 36  TVGNQNPWAPYESYRRECSQGICSVYCPQWCYVIYPPPP-FDIGNDDD--DGGSTFSPLI 206
           +VGNQNPWAPY++Y+ +C+QGICS+YCPQWCY+I+PPPP F++G  DD  D G+ FSPLI
Sbjct: 3   SVGNQNPWAPYDTYK-DCTQGICSIYCPQWCYIIFPPPPPFNLGGSDDGGDSGTDFSPLI 61

Query: 207 IAIIGVLVSAFLLVCYYTIITKYCRRRNNSITSIANRDVTNHDQWQDVAQSGLDDKIIKS 386
           IAIIG+L SAF+LV YYTII+KYCRRRNN   S+      +++  Q     GLD+ +IKS
Sbjct: 62  IAIIGILASAFILVSYYTIISKYCRRRNNDEDSMTYE--VSNESLQGAGNGGLDETLIKS 119

Query: 387 ITVCKYQKGDGLIEGTECAVCLSEFQENENLRLL 488
           ITV  Y+KGDG IEG +C+VCL+EFQEN++LRLL
Sbjct: 120 ITVRIYKKGDGFIEGMDCSVCLTEFQENDSLRLL 153


>ref|XP_002884394.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330234|gb|EFH60653.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 355

 Score =  192 bits (488), Expect = 2e-47
 Identities = 95/167 (56%), Positives = 124/167 (74%), Gaps = 16/167 (9%)
 Frame = +3

Query: 36  TVGNQNPWAPYESYRRECSQGICSVYCPQWCYVIYPPPP-FDIGNDDDDGGSTFSPLIIA 212
           + GN NPW  Y+SYR +CSQG+CSVYCPQWCYVI+PPPP F + ++DD   S FSPL+IA
Sbjct: 3   STGNPNPWGTYDSYR-DCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLLIA 61

Query: 213 IIGVLVSAFLLVCYYTIITKYC-RRRNNSITS----IANRD--VTNHDQWQDVAQ----- 356
           +IG+L SAF+LV YYT+I+KYC RRR+NS +S    + NRD  +++   WQ+        
Sbjct: 62  LIGILASAFILVSYYTLISKYCHRRRHNSSSSTSAAVINRDHGISSDYTWQEATNPNPTI 121

Query: 357 ---SGLDDKIIKSITVCKYQKGDGLIEGTECAVCLSEFQENENLRLL 488
               GLD+ +IKSITV KY+K DG +E ++C+VCLSEFQENE+LRLL
Sbjct: 122 GGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLL 168


>ref|XP_002266511.1| PREDICTED: RING-H2 finger protein ATL51 [Vitis vinifera]
           gi|297744791|emb|CBI38059.3| unnamed protein product
           [Vitis vinifera]
          Length = 338

 Score =  191 bits (485), Expect = 5e-47
 Identities = 91/154 (59%), Positives = 117/154 (75%), Gaps = 3/154 (1%)
 Frame = +3

Query: 36  TVGNQNPWAPYESYRRECSQGICSVYCPQWCYVIYPPPPFDIGNDDDDGGSTFSPLIIAI 215
           +VGN +PWAPY+ YR +CSQGIC+ YCPQWCY+I+ PPP      +DD G+ FSPLI+AI
Sbjct: 3   SVGNSDPWAPYDGYR-DCSQGICNEYCPQWCYIIFSPPP----PSEDDSGTDFSPLILAI 57

Query: 216 IGVLVSAFLLVCYYTIITKYCRRRNNSITSI---ANRDVTNHDQWQDVAQSGLDDKIIKS 386
           IG+L SAFLLV Y+T+I+KYCRRR    TS     N+D   +DQ   VA +GL++  IKS
Sbjct: 58  IGILASAFLLVIYFTVISKYCRRRRGRRTSAEGNGNQDEMVNDQPLQVASTGLEEGFIKS 117

Query: 387 ITVCKYQKGDGLIEGTECAVCLSEFQENENLRLL 488
           ITV KY+K  G++EGT+C+VCLSEF++ ENLRLL
Sbjct: 118 ITVYKYKKSGGVVEGTDCSVCLSEFEDGENLRLL 151


>ref|XP_002325888.1| predicted protein [Populus trichocarpa] gi|222862763|gb|EEF00270.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  184 bits (467), Expect = 7e-45
 Identities = 86/155 (55%), Positives = 112/155 (72%), Gaps = 4/155 (2%)
 Frame = +3

Query: 36  TVGNQNPWAPYESYRRECSQGICSVYCPQWCYVIYPPPPFDIGNDDDDGGSTFSPLIIAI 215
           T  NQNPW+PY +Y+ +CSQGICSVYCPQWCY+I+PPPP  +   DD   +  SPL IA 
Sbjct: 4   TADNQNPWSPYSTYK-DCSQGICSVYCPQWCYIIFPPPP-PLSLGDDASNTDLSPLTIAF 61

Query: 216 IGVLVSAFLLVCYYTIITKYCRRRNNSITSIANRDVTNHDQWQDVAQSG----LDDKIIK 383
           IG+L SAF+LV Y+T+++KYC RR +   +    D  N DQ  + A  G    LD+ ++K
Sbjct: 62  IGILASAFILVTYHTLVSKYCSRRGHGNDTTELND--NQDQMGNEASQGIPGGLDEAVLK 119

Query: 384 SITVCKYQKGDGLIEGTECAVCLSEFQENENLRLL 488
           SIT+CKY+KGDG +EGT+C+VCL EFQENE+LR L
Sbjct: 120 SITICKYKKGDGFVEGTDCSVCLGEFQENESLRRL 154


Top